Colletotrichum lupini: CLUP02_18287
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Entry
CLUP02_18287 CDS
T08561
Name
(RefSeq) coatomer WD associated region
KO
K17302
coatomer subunit beta'
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_18287
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clup04147
]
CLUP02_18287
Membrane trafficking [BR:
clup04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CLUP02_18287
Exosome [BR:
clup04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
CLUP02_18287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
73352199
NCBI-ProteinID:
XP_049138413
UniProt:
A0A9Q8SHU9
LinkDB
All DBs
Position
10:complement(join(3862436..3863471,3863522..3863685,3863733..3864148,3864197..3865166,3865310..3865327))
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AA seq
867 aa
AA seq
DB search
MKVDVKRQLFARSERVKGIDFHPQEPWILTTLYSGHVYIWSYETQQIVKTFELTDVPVRA
GRFVARKNWIVCGSDDFQIRVYNYNTSEKITSFEAHPDYIRAIAIHPTQPFVLTASDDMT
IKLWDWEKGWKCVQVFEGHGHYVMGLAINPKDTNTFASASLDRTVKIWSLGSATPNFTLE
AHEAKGVNHVDYYPHSDKPYLLTTSDDRTVKVWDYTTKSLIATLEGHTNNVSFACYHPEL
PVIISGSEDGTIRIWHANTYRFEQSLNYGLERAWCVSYQKGKQGVAVGFDDGAVVVKLGR
EEPAVSMDASGKLVWARHNEVVSAIIKGGDASIKDNEPISLPVKELGTCEVYPSTLVHNP
NGRFVAVCGDGEYIIYTALAWRNKAFGSALDFVWASKENTNDFAIRESATSVKVYKNFVE
KAGGLDVGFQAEGLTGGVLLGVKGQGGISFFDWQTGGLVRRIEVEPREVYWSDSGELVAL
ACEDTFYVLRFSREAYVEGVQTNQIDEDGVEAAFEVITDINESVRTGEWVGDCFLYTNST
NRLNYLVGDQTYTVSHFDQSMYILGYIQRDSRIYLADKDVGVTSFSLSLPVLEYQTLVLR
DDMETAQELLHTIPADQLNKIARFLEGQGHKELALEVATDPEHKFDLALGLGQLDTALEL
AREADVEHKWKTVGDAALAGWQVAVAQECFTHAKDLGSLLLLYSSTSDRSGLSKLSDQAQ
EAGAHNVAFSCKWLLGDVAGCVEILTKTGRLAEAVLFSQTYKPSLTADVVKEWKESLEKG
KKGRVAKMVGAPVEDEDLFPEWDEWLQLEKQGGAAPQVAEVTKVNGTDATEEAEGAEEAE
EADEADEADGADEDADEEMAEAEEDEE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgacgtgaagcgacaattgttcgcccgcagcgagcgggtgaagggcattgac
tttcaccctcaagagccatggattcttacgactttgtacagcggtcatgtctacatctgg
tcatacgagactcagcagatcgtcaagaccttcgagctcaccgatgtccctgtccgagcc
ggccgattcgtcgcaagaaagaactggattgtctgcggttccgatgactttcagattcgt
gtatacaactacaacacctcagagaagatcacctccttcgaggcccatcccgattacatt
cgcgccatcgccattcacccgacacaacctttcgtgctgaccgcctccgatgacatgacg
attaagctctgggattgggagaagggctggaagtgcgtccaagtctttgagggccacggc
cattacgttatgggcctcgccatcaaccccaaggataccaacaccttcgcttccgcatcc
cttgaccgtactgtcaagatctggagtctcggctcggcgacgcccaacttcactctcgag
gcccacgaggccaagggtgtcaaccacgtcgactactaccctcactctgacaagccctat
cttctgacgacatccgacgatcgcaccgtcaaggtctgggattacaccaccaaatctctg
atcgccaccctcgagggccacacgaacaacgtctctttcgcatgctatcaccccgagctg
ccagtcatcatttccggttccgaagacggcaccattaggatatggcacgcaaatacatac
cgattcgagcagtctctcaactatggcctggagcgcgcatggtgcgtttcctaccagaag
ggcaagcaaggcgtagctgttggtttcgacgatggtgctgtcgttgtgaagctgggtcgt
gaggagccagccgtgtcaatggatgcgtcaggaaagcttgtgtgggcccgccacaacgaa
gtcgtctctgcaattatcaagggtggagatgcctcgatcaaggacaacgagcccatttcc
cttcctgtcaaggagctcggtacctgcgaagtgtacccctcgacccttgtacacaacccg
aatggtcgatttgtcgcagtctgcggagacggagaatacatcatctacacggctctcgct
tggcgtaacaaggcctttggctctgcgctggacttcgtctgggcatccaaggagaacacc
aacgacttcgccatccgagagtcggcaaccagcgtcaaggtgtataagaactttgttgag
aaggcgggtggcctcgatgtcggtttccaggctgaaggcttgactggaggtgtccttctt
ggtgtcaagggccaagggggtatctcattctttgactggcagaccggtggtctggtcaga
cgcattgaggtcgagccgagagaggtgtactggtctgatagcggcgaattggttgccctc
gcatgcgaagacaccttctacgtcttgcgtttctcgcgcgaagcctacgtcgagggtgtc
caaaccaaccagattgacgaagatggtgtcgaggccgcctttgaggtcatcacggacatc
aacgagagtgttcgcaccggagagtgggttggagattgcttcctatacaccaacagcacc
aaccggttgaactaccttgtgggcgaccagacttacacggtatcccacttcgaccagtcc
atgtacatcctgggttacatccagcgtgattcaagaatctacctggctgataaggacgtc
ggtgtcacctccttttccttgtccttgcctgtgctcgagtaccagactctggttcttcgt
gacgatatggagactgcacaagaactcttgcacacgattcctgcagaccaactcaacaag
atcgcgcgattcttggagggacagggtcacaaggaacttgccctggaggttgctaccgat
cccgaacacaagtttgacctcgctctcggactgggtcagttggatactgctctcgagttg
gcgagagaggcagatgttgagcacaagtggaagacagtcggagacgctgcccttgccgga
tggcaggtcgccgtggcgcaagagtgctttacacatgcgaaggaccttggctcgttgctc
cttctctactcttccacatccgaccgcagtggcctgtcaaaactctctgaccaagcgcaa
gaggccggcgctcacaacgtggcatttagctgcaagtggctgctaggcgacgttgctggc
tgcgtggagattcttaccaagactggacggttagcggaggctgtcttgttctcgcaaaca
tacaagcctagtctgacggcagatgtcgtcaaggagtggaaggaaagcctcgaaaagggg
aagaagggccgcgtcgccaagatggtcggtgctccggtagaagacgaagacctgttcccc
gagtgggacgagtggcttcaactcgagaagcagggtggcgccgcgcctcaagttgccgag
gtcacgaaggtcaacggaacagacgcgactgaggaggccgagggggccgaggaggcagag
gaggcagacgaggcagacgaggcagacggggccgatgaggacgccgacgaggagatggcc
gaggcggaagaggatgaggagtag
DBGET
integrated database retrieval system
