Clavispora lusitaniae CBS 6936: A9F13_01g09713
Help
Entry
A9F13_01g09713 CDS
T05147
Name
(GenBank) putative U4/U6-U5 snRNP complex subunit
KO
K12855
pre-mRNA-processing factor 6
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_01g09713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clus03041
]
A9F13_01g09713
Spliceosome [BR:
clus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
A9F13_01g09713
Complex C
U5 SnRNP specific factors
A9F13_01g09713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_N
TPR_16
TPR_2
TPR_1
TPR_8
ARM_TT21_N
Motif
Other DBs
NCBI-ProteinID:
OVF11452
UniProt:
A0AA91Q5E1
LinkDB
All DBs
AA seq
864 aa
AA seq
DB search
MERKAFLDQEAPPGYVAGVGRGATGFVTSAQSARFESAFGGENTEVPDDSGLLAANDDDE
ADRIYQEIDRRLSRPKKEEKATPGVEIETGTGVIRHEFSTLKAGLASVSADEWAALPEAA
DITRKNKRQRLLDQQSQRTYAAPDTLIASRAQVAEIDKWAEQETAPEDVERRRAVLSSLR
RTEPHRASSWIASAKLEETVLNFGRAKALIAEGCRRAPHNETVWLESVRLHRSEPTKVCK
NIIAEALRANTYSEKLWMQAMDLENPHDVVSRKKIAMKALEYLPENSKLWQTLVDLEDTK
EDKIRLLSKATDLCSDWSFWSALVALSDYGDARAVLNRARKKLTNEPRVWVAALQLEERE
KADVTVKRLSSMLAKGMKEVGEDTWDVRKWLDEASQAEKDGFFKSCAAIVENAMSLLSEE
TRLNQMIQWAETYASSPKTASSIYESITKFYPHNISSWTALFASLKKEAEISRNSTELEL
SAAADRRENEQTSSQTPKDLQQLYSYYENAISLNPELALFRLMYAKDKWILGEDVAGARN
ILESASQQLPTNEKIWLARVKLEVRNYEYEQAFRLSNEALDAINTEPRLWYKHIHLLRFC
VYKQMDFVSQEDLLQKSSSALDLFPDNYKLYLQRSQILLDIDDVKGARDILTVGARKCTQ
AAEIHVSIAELDLGQGFPARARANLDSALLENPKSEKLWECKIRLEQTENDMITARQLVS
KALKELSSSPVIWLQHLSMIQKSSHRKNAFLDALKHTNNATEVLLGIGVFFWLEGKFSKA
KAWFDRALTADRKNGDAWGWNYCFFTKMGPPQEMDRLLAEVKDAFDDINKGKAWISVTKD
KANLNISPGECLKLVAEKLLSTTA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaaagcatttctagaccaggaagcaccgccaggatatgttgccggagtcggt
cgaggagccactggatttgtgaccagcgcacagtcagcacggtttgagtctgcctttggc
ggtgaaaacaccgaagtgcccgatgattcgggcttgcttgctgcaaacgacgatgacgaa
gctgatcggatctaccaggagatcgacaggcggcttctgcggcccaagaaagaggagaaa
gcgacgcctggcgtggaaatcgaaacgggcaccggagtcatccgccatgagttctccaca
ttgaaagccggcttggcctcggtttctgcagacgaatgggctgcccttccggaggcagca
gatatcacccgcaaaaacaaacgccagcgtcttcttgaccaacagagccaaaggacatat
gctgctccagacactttgattgcgctgcgggcccaggtggcggaaatcgacaagtgggcc
gagcaagaaacggcgcccgaagacgtcgagcggcggcgcgcggtgctttcttcgctcagg
cgcaccgagccgcaccgcgccagcctgtggatagcgtcggccaaacttgaagaaacggtg
ctcaatttcgggcgcgcaaaggcgctcattgcggagggatgtcggcgcgcgccccacaat
gagacggtttggctcgaaagcgtgagactacatcgcagcgagccaacaaaggtgtgcaag
aacataatcgccgaagcgttgcgtgccaacacatattcggaaaagttgtggatgcaggcg
atggacctagaaaacccccacgatgtggtttctcgcaaaaaaatcgccatgaaagcgctc
gagtatttgccagaaaactcaaagctttggcagacgcttgtggacttggaagacaccaaa
gaggacaagatccgccttctctcaaaagccacagacctctgctctgattggagtttctgg
ctggcccttgtcgcattgtcagattacggggacgcacgggctgttttgaaccgagccagg
aaaaagctcacaaacgagccgagagtatgggttgccgctttacagttggaggagagagaa
aaggcagatgtcacggtcaaacgtctcagtctgatgttggccaaaggaatgaaggaagtg
ggtgaagatacttgggatgttcgcaaatggcttgacgaggcctctcaggcagaaaaggac
ggcttcttcaaatcctgtgcggcgatagtcgaaaacgccatgtcacttttatctgaagag
actcgtctcaaccagatgatccaatgggcggaaacttatgcgtcttccccaaaaacggca
agttctatttacgagagcatcacgaagttttatccgcataatatttcgagctggacagca
ttgtttgcgtcgctaaagaaagaggcggagatttctcggaatctgactgagctcgaattg
tcggccgcagctgacaggcgtgaaaacgaacaaacatcgtcccaaaccccaaaggacttg
cagcagttgtacagttactacgagaatgcgatttctctaaacccagagttggctttgttc
cgcttgatgtacgctaaagacaagtggattcttggtgaagatgtggctggcgcaagaaac
attcttgagctggcttcacaacaacttccaactaacgaaaaaatctggttggctcgcgtg
aagcttgaagtcagaaattacgaatatgagcaagcattccgcctttcaaatgaggcgctc
gacgcgattaacacagagccgaggttatggtacaagcacatccacttgcttcggttttgt
gtctacaagcaaatggattttgtatctcaagaagatcttttgcaaaaaagttcatctgct
ctagatttgtttcctgataattacaagctttatctccaaagatcgcagattcttcttgac
atcgacgatgtgaaaggtgctcgcgatattctcacggtgggggcaagaaaatgtacccaa
gcagcagaaatacatgtgtcaatagcagagctagatcttggacagggttttccagcacgg
gcacgggcaaatctcgattctgcacttttggaaaacccaaaaagtgaaaaactctgggaa
tgcaaaattcgattggagcaaactgaaaacgacatgatcaccgctcgccagctagtcagt
aaagcgttgaaggaacttctgtcctcaccggtgatttggctacagcatttgtcgatgatc
cagaaactgtcacatcggaaaaatgcttttctagatgcattgaaacacacaaacaatgcc
actgaagttcttttgggtataggagtgtttttctggttagagggtaaattttccaaggca
aaagcgtggtttgaccgtgccttgacagcagaccgcaagaacggcgatgcttggggatgg
aattactgcttcttcacgaaaatggggcctccgcaagaaatggaccgcctattggcagaa
gtaaaagatgcctttgatgatattaataagggaaaggcctggatttctgtcaccaaagat
aaagcaaatttaaacattctgcccggcgagtgcttgaaactcgtggctgaaaagcttttg
ctgaccacggcataa
DBGET
integrated database retrieval system
