Clavispora lusitaniae CBS 6936: A9F13_02g00682
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Entry
A9F13_02g00682 CDS
T05147
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_02g00682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clus03041
]
A9F13_02g00682
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_02g00682
Enzymes [BR:
clus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9F13_02g00682
Spliceosome [BR:
clus03041
]
Complex A
U1 snRNP components
U1 related factors
A9F13_02g00682
Complex B
A9F13_02g00682
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
Pre-60S particles
Helicases
A9F13_02g00682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
OVF10274
UniProt:
A0AA91Q387
LinkDB
All DBs
AA seq
533 aa
AA seq
DB search
MSDYNGGYNNYNSGYNNYNNQGSYRNDRNGGFRGGRGGRFGGRRVDERIELTTPEWDLDS
LPKFEKNFYTEHPDVAARSDAEVAAFRKEHDMTVEGQDIPKPITSFEEAGFPDYVLSEVK
QQGFPKPTAIQCQGWPMASSGRDMVGIASTGSGKTLSYCLPAIVHINAQPLLKPGDGPIV
LILAPTRELAVQIQTECSKFGSSSRIRNTCIYGGAPKGQQVRDLARGVEICIATPGRLID
MLETNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKNLT
RDYLVDPIQVTIGSLELSASHTITQLVEVVSEFEKRDRLLKHLETATADKEAKCLIFCST
KRACDEVTSYLRGDGWPALAIHGDKDQNERDWVLREFRSGKSPIMVATDVAARGIDVKGI
TYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSFFSEGNSKLGGDLCKIMREANQTIPPE
LQRYDRRSFGSHIRYGRGGYGRGRGRGGNGGRGGFRGRQSGSNVQPLGDRRRF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactacaacggaggttacaacaactacaacagtggctacaacaactacaacaac
caaggcagctacagaaacgaccgtaacggaggattcagaggcggcagaggtggccgtttt
ggcggaagaagagtcgatgagagaatcgaattgaccactcctgaatgggacttggactcg
ttgccaaagttcgagaagaacttttacacagaacacccagacgtggctgcacgttcggac
gccgaggttgctgctttcagaaaggaacacgacatgaccgtcgagggccaggacattcct
aagccaatcacttctttcgaagaggctggtttcccagactatgtgttgagcgaagttaag
caacaaggcttcccaaagccaactgccatccagtgtcaaggttggcctatggcttcgagc
ggtagagacatggtgggtattgcctccactggttccggtaagactttgtcttactgtttg
ccagctattgtgcacatcaacgcccagcccttgttgaaaccaggtgacggaccaattgtg
ttgattttggctcctaccagagaattggctgtgcaaatccaaacagaatgttccaagttt
ggttcttcttctagaatcagaaacacctgtatttacggaggtgctcctaagggtcaacag
gtcagagacttggccagaggtgtggaaatctgtattgccactccaggtagattgattgac
atgttggaaaccaacaaaacaaaccttagaagagtcacatacttggttttggacgaagcc
gacagaatgttggatatgggtttcgaacctcagatcagaaagatcgtcgaccaaatcaga
ccagaccgtcaaactttgatgtggtctgctacctggcctaaggaggtcaagaacttgacc
agagactacttggtggaccctatccaagttaccattggttctttggaattgtctgcttct
cacacaatcacccaattggttgaggttgtcagcgaattcgagaagagagacagattgctc
aagcacttggaaactgccactgccgacaaggaagccaaatgtttgattttctgttctacc
aagagagcttgtgacgaagtcacttcttacttgagaggagacggctggcctgctttggcc
atccacggtgacaaggaccaaaatgagagagattgggttttgagggaatttagatcgggc
aaatcgcctattatggtggccaccgatgtggctgccagaggtattgacgtcaagggtatc
acttatgtcatcaactacgacatgccaggcaacatcgaagactacgtgcacagaatcgga
agaaccggtagagctggcaccaccggtactgctgtttccttcttctccgaaggaaactcg
aagttgggcggtgacttgtgtaagattatgagagaggccaaccagaccattcctccagaa
ttgcagagatacgacagaagatcttttggttcgcacattagatacggtcgtggtggatat
ggcagaggaagaggtagaggaggtaacggtggacgtggtggcttcagaggccgtcagtcg
ggatccaacgtgcaacctttgggcgacagacgccgcttttaa
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