Clavispora lusitaniae CBS 6936: A9F13_03g00407
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Entry
A9F13_03g00407 CDS
T05147
Name
(GenBank) putative FG-nucleoporin
KO
K14308
nuclear pore complex protein Nup54
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
A9F13_03g00407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_03g00407
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
A9F13_03g00407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
DBI_PRT
FISNA
CorA
Motif
Other DBs
NCBI-ProteinID:
OVF09919
UniProt:
A0AA91T357
LinkDB
All DBs
AA seq
588 aa
AA seq
DB search
MFGATSGGTGMFGSTQNKPSAFGTQPSSGNGGFSFGSSNTTNTNNNAPAGNTGFSLGANT
NSGGLFGNKPASTSNLASGTFGSSNSTGFGSNTGSNNLFGSANTGTNNNSNTGGLFGKPQ
GAANTTFGNTGNQTSTFGNSGNQASTFGSTNTNTQSGGLFGNTNTNNQASSGGLFGSKPA
GTTSGLFGSTNNTTSAPSGGLFGSKPAGSTFGGSSGAPASGGLFGNTNTNTNTNTATNAN
TNANTSGGLFGSSNTGATGGLFGSSTAATGTSSGLFGGQSSNNNTTQPSFNWSGQKPANQ
APGALNLSLSSQAPSQTQQTTSYTPAINDQVIKLKEQWDPSSGKCALKTHLYNKFTEEEI
NVLMQQPRPANESPEDWEQAMSKRPGPLYYPVKVSSFSEVAQRIEVQLDHVAKSRILLRN
INDKMGQISSKHDLDNTTRIMQAKVKHTNLSRRLLRLATVLAMLKLKGYPLLPEEEEISK
QFQTLLAKVSDPNGSVGKLNDIYARLAILKGRSEDLSSQLESSINNMNGGLNGLTRENTE
AVGEGATQIDQVVDSLTKLLYKQQVGLNYVNEIVQKDLDIVNKATSKR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctacatctggaggcacggggatgtttggaagcacacaaaataagccttct
gcttttggaacccaaccttcttcgggcaatggcgggtttctgtttggctcttcgaatact
accaatacaaacaacaatgcgccagctggaaatactggattctcgcttggtgcaaacacc
aattcgggtggtcttttcggcaacaagccagcctcaacctcaaaccttgcaagcggcact
tttggaagctccaacagcaccggttttggctcgaatactggtctgaacaatctttttggt
tctgccaacaccggcactaataacaacagcaacactggtggtctttttggcaagccgcaa
ggagcagcaaacaccacttttggcaacactggcaaccagacaagcacttttggcaattct
ggaaatcaagcaagcactttcggcagtaccaacacaaacactcaactgggtggtttattt
ggaaacacaaacacgaacaatcaggcctccctgggaggcttgtttggcagcaaacctgcg
ggcacgacttctggtctatttggaagcacaaacaacacaacaagtgctccatctggaggt
ctctttggcagtaaaccggctggcagcacttttggtggatcaagcggtgcaccagcgtct
ggcggattgtttgggaacacaaacacaaacacaaacacaaatacagcgactaacgcaaac
accaatgccaacacaagtggcggtttgttcggctcttcaaatacaggagcaacaggaggc
ctctttggatcgtcgactgctgctactggcacttcttctggtctttttgggggccaatct
tccaataataacactacgcagccatcgttcaattggtcaggccaaaagcctgccaaccag
gctcctggagctttgaacttatctttgtcgtcccaggcgccttcccaaacacaacaaact
acatcctacacaccagcaatcaacgaccaggttataaagttgaaagagcaatgggaccca
tcctcgggcaaatgtgcattgaaaacacacttatacaacaagtttactgaagaagaaatc
aatgtgctcatgcaacagccacggcctgcgaacgaatcacccgaagactgggaacaagcc
atgtcgaaaagacctgggcctttgtattacccagttaaagttagctcattcagcgaggtt
gcccagagaatcgaagttcagcttgaccatgtggccaagtcccgcattcttcttcgcaat
atcaacgacaagatgggccagatatcttcaaagcatgatttagataacacaactcggatc
atgcaagccaaagtgaaacacaccaatctttcgcgtcgtttgctaaggttggccacagtt
ctagcaatgttgaagttgaaaggctacccgctcttgccagaggaggaagagatatccaaa
caattccaaacccttctcgcaaaagtctcggaccccaacggttctgtgggtaagttgaac
gacatttacgcccgtttggcaatcctaaagggacggagcgaagacttgtcttctcagtta
gagtcatctattaataacatgaacggcggtttgaatggactcactcgtgaaaatacagaa
gctgttggagaaggtgccacacaaatagaccaggtggtggacctgttgacgaaacttctt
tacaagcagcaggtgggactcaattacgtgaacgaaatagtgcaaaaagacttggatatt
gtcaacaaggcaacttccaagaggtga
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