KEGG   Clavispora lusitaniae CBS 6936: A9F13_03g00561
Entry
A9F13_03g00561    CDS       T05147                                 
Name
(GenBank) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03018  RNA degradation
clus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    A9F13_03g00561
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A9F13_03g00561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clus03019]
    A9F13_03g00561
   03041 Spliceosome [BR:clus03041]
    A9F13_03g00561
Messenger RNA biogenesis [BR:clus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     A9F13_03g00561
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     A9F13_03g00561
Spliceosome [BR:clus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    A9F13_03g00561
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: OVF09933
UniProt: A0AA91T310
LinkDB
AA seq 135 aa
MDNNHRHGGRQNQNRNRNDRHDRSDRNDRRSNNSRQDRPKKEAILDLKKYYDQKVVVKFI
GGRQVVGVLKGYDQLMNLVLEQVVEQLRDPEDESMLTEKTRELGTVIVRGPQMLTISPLA
GTEEISNPFAVEQSV
NT seq 408 nt   +upstreamnt  +downstreamnt
atggataacaaccacagacatggcggtcgccagaaccaaaacagaaatagaaacgatcgc
cacgatagactggacagaaacgatcgaagatccaacaactccagacaagacagacccaag
aaagaggccatcttggacttgaaaaaatactacgaccagaaggtggtggtcaagttcatt
ggcggcagacaggttgtgggcgtcttgaaaggttacgaccagttgatgaacttggttttg
gagcaagtggtggagcagctcagagacccagaggacgagtccatgttgacggaaaaaaca
agagaattgggaactgtgattgtgaggggcccgcagatgttgaccatttctccgttggca
ggaacagaagaaatctccaacccttttgcggtggaacagagtgtataa

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