Clavispora lusitaniae CBS 6936: A9F13_03g01595
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Entry
A9F13_03g01595 CDS
T05147
Name
(GenBank) putative TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03022
Basal transcription factors
clus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A9F13_03g01595
09124 Replication and repair
03420 Nucleotide excision repair
A9F13_03g01595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_03g01595
03036 Chromosome and associated proteins [BR:
clus03036
]
A9F13_03g01595
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_03g01595
Enzymes [BR:
clus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A9F13_03g01595
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A9F13_03g01595
Chromosome and associated proteins [BR:
clus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
A9F13_03g01595
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A9F13_03g01595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
OVF10026
UniProt:
A0AA91Q286
LinkDB
All DBs
AA seq
790 aa
AA seq
DB search
MKFYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ
MHYPEHRKIVYCSRTMSEIEKALVELHSLMEYRASELGYVEEFRGLGLTSRKNLCLHPTV
SKERKGAVVDEKCRRLTNGQLKQKLEQQNVSQDEMRNHSDQYGLCSFHEKLYDYDQHDLI
PSGVYSFEALLDYCKQAGTCPYFTVRRMLSFCNIIIYSYHYLLDPKIAERVSRELSKDSI
VIFDEAHNIDNVCIESLSLYLTDDTLKRAGRGANKLAEAVDEMKAQDSAKLQDEYEKLVE
GLRQNEIARDEELFMANPALPQDLLEEAVPGNIRKAEHFLSFLKRFIEYLKTRMKVLHVI
SETPVSFLQHLKELTFIERKPLRFCSERLSLLVRTLDLADVDDLNALKDIATFATLVSTY
DTGFQLILEPFETEGSTVPNPILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPKM
LNFQTVIQESYTMTLARRSFLPMIVTKGSDQTSISSRFEIRNDPSVVRNYGSLLIEFSKI
TPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKYKLILVETPDAQETALALETYRKACSN
GRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHYQIKEND
FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFKNKKNQLPKWIAQALLESDLNLSTDM
ALAAAKKFLRTLAQPSNPKDQEGVSVWNLEQLESFQRQQKQQKQQKIEEGPEEAEEDDFM
DLDDADLDLL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctatatcgacgacttgccggtgctttttccgtacccacggatctaccccgag
cagtatgcttacatgtgcgatatcaagaagaccttagatgtgggtggaaactgcattttg
gaaatgccttcaggaactggcaaaaccgtctcgcttctttctcttaccgtggcgtaccag
atgcactatcccgagcaccgcaagattgtctactgctcgcggacaatgtcggagattgaa
aaggcgttggtggagttgcatctgctcatggaatatcgtgccctggaacttgggtatgtg
gaagagttccggggccttggactcacatccagaaagaacttgtgtttgcatccgaccgtg
tcgaaggaaagaaaaggggcggtggtggacgaaaagtgccgccggctcaccaacggacaa
ttgaagcagaaacttgagcaacagaatgtgtcgcaggacgagatgcggaaccactctgac
cagtacggcctatgctcgttccacgagaaattgtacgactacgaccagcacgacttgatt
cccagtggcgtttattcgttcgaggcgttgcttgactactgcaagcaggccggaacgtgt
ccttacttcacggtcagaagaatgctttccttctgcaacatcatcatctactcgtaccac
taccttctcgaccctaagattgccgagcgtgtctctcgtgagctcagcaaagatagcatt
gtcattttcgacgaggcccacaacatcgacaatgtgtgcatcgaatcgctctcgctatat
ttgaccgacgacacgctaaaacgagctggccgaggcgctaataagttagccgaggcggtc
gacgaaatgaaggcccaggatagcgccaagcttcaggacgaatacgaaaaacttgtcgag
ggacttcgacagaacgaaattgcacgagacgaagagcttttcatggcaaatccggccttg
ccgcaagatcttttggaagaggctgtgccgggaaatatccgaaaggcagagcatttcctc
tccttcttgaagcggtttattgagtacttgaaaacacgcatgaaggttcttcatgtcatc
agtgaaaccccagtcagcttcttgcagcatctcaaagaactcacattcatcgaaagaaag
cctttgcgcttttgcctggagcggctctccttgcttgtgaggacgctagacttagccgat
gttgatgaccttaatgcattgaaggatattgccacattcgccacgttggtttctacgtac
gacactggttttcaacttatcttggagccgttcgaaactgaggggctgacagtgcctaac
cccattttgcatttcacgtgcttggatgcatctatagccatcaagcctgtttttgatcgt
ttcctgtcggtgattatcacctccggaaccatttctcctttggacatgtatccaaaaatg
cttaatttccagacggtgatccaggaatcgtataccatgacattggcgagacgttcattc
ttgcccatgattgtgaccaagggcctggaccagacgtcgatatcatcgcgttttgaaatc
agaaacgacccgtctgtggtccggaactacggttcgcttctcatagaattttccaagatc
acccctgatggtatggtggtcttcttcccctcctacttatatatggagtcgattatttcc
atgtggcagaccatgggtgttttagatgaggtttggaagtacaagttgattcttgttgaa
actcccgatgcacaggaaacagcgttagcgttggaaacttacaggaaagcatgttcgaat
ggcaggggcgccgttcttctctctgttgcgcgtggaaaagtttcagagggaatcgatttc
gaccatcattacgggcggactgtgcttatgattggaattccgttccagtatactgaatcg
agaattttgaaagcacgacttgagtttttacgtgaccattaccagatcaaagagaacgat
tttctttctttcgatgccatgcgacatgcggcgcaatgtttgggtcgggtcttgcgtgga
aaggacgactacggtatcatggtcttggccgatcggcgatttaaaaacaagaaaaaccag
cttcccaagtggattgcgcaggcacttctcgagtcggaccttaatttatctacagatatg
gcgttggcagcggcaaagaaatttttacgtactctagcacaaccgtcaaatccaaaggac
caggaaggtgtatctgtatggaatttggagcagcttgaaagcttccaaagacagcagaaa
cagcagaagcaacagaagattgaagaagggccagaagaggcagaggaggatgattttatg
gatctcgacgacgcagatctcgatcttttataa
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integrated database retrieval system
