Clavispora lusitaniae CBS 6936: A9F13_03g01958
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Entry
A9F13_03g01958 CDS
T05147
Name
(GenBank) putative TFIIH/NER complex subunit
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03022
Basal transcription factors
clus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A9F13_03g01958
09124 Replication and repair
03420 Nucleotide excision repair
A9F13_03g01958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_03g01958
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_03g01958
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A9F13_03g01958
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A9F13_03g01958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-ProteinID:
OVF10058
UniProt:
A0AA91Q2G5
LinkDB
All DBs
AA seq
640 aa
AA seq
DB search
MASVSGACVISKVSGLLQIREDTVPSKLMWKAIDQDKSMEIPLNKLSKLQASPDSSPKML
LKLFYTAAGSQEVKNIKLTFNNRQTMNAVKETLQTIVARQKTVIRDSPAPATESGTATPA
GASENSARSTPQPGDPLDFSHPGSLSDASLLKNRHLQQKLLLEDKTLRNIFTESVINFKL
SPALFWSTRTGQLRTYALTISQHRGPYNVLSSIKPVATSDNQVNVNVTRDVINEIFTTYP
IIRHAFDELVPHKLSEGEFWSRFFNSKLFRRLRGDRINTANIRGDVVIDKYLYVDADFVE
EEKSSAGENDASTHHVDPFLDLQANEEDNPQKLGLLPDFTMKFSDDDKNGREQRTSGRNE
NEMMILMRNMNTLSSKMINITSEQEAPAESAQQMLAEHEKELAISDLNDVEQPHYVPLDL
DMNSRHATDSAKTENADTTPLSPEETRQLWLANVFEPTDSGINLSETYERADAIAKANAD
VTALVKHNFRVFKSEHNIKDPSAALNFLREEEKKELTTYNMTITEFLSHFWNLFLNGGNP
AQLKKLFTNLRNCQSLLDKLEKKITEELSNHDSVKSNEKLREKLTKDVVTCLAPLNAGLT
KACNEYMEAYRKSDAESNGTPASDGNGPAINENGKRPLQV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtttccggcgcctgtgtcatttccaaagtgtcgggtcttctccagatcagg
gaagacaccgtgccgtccaagctcatgtggaaggccatcgaccaggacaagtcaatggag
attcctttgaacaagctttccaagttgcaagcgtctcccgactcgtcgcccaagatgctt
ctcaagctcttctacacggccgcaggctcgcaggaggtcaagaacatcaagctcacgttc
aacaaccgccagaccatgaacgctgtcaaggaaacgctccagaccatagtggccaggcag
aaaacggtgattcgagacagcccggcgcctgcgacggagtctggcacggcgactccggcc
ggcgcaagcgagaatctggcccggctgacgccgcagcctggcgatccgctcgacttctcg
caccctggctccctcagcgacgccagtcttctcaagaacagacatctccagcagaagctt
ttgctcgaagacaagacgctccgcaacatcttcacggagtcggtgatcaacttcaagctc
tcgccggcgctcttctggtccacgcggacgggccagctccgcacgtatgcgctcaccatc
tcgcagcacagaggaccctacaatgttctttcttccatcaagcctgtggccacatccgac
aaccaggtgaacgtgaacgtcacgcgagacgtgatcaacgagatcttcaccacgtacccg
atcattcggcatgcgtttgacgagttggtgccgcacaaactcagcgagggcgagttttgg
tctcgattcttcaactccaagcttttccgccgtctccgtggcgaccgcatcaacacggcc
aacatcagaggcgacgtggtcatcgacaagtacttgtatgtggatgccgactttgtggag
gaggagaaaagcctggcgggcgaaaacgatgcttccacacaccatgtggacccgtttcta
gacctccaggccaacgaggaagacaatccgcagaagctcggcctcttgcccgacttcacc
atgaagttctcggacgacgacaagaacgggcgcgaacagcggacgctgggccgaaacgag
aacgaaatgatgattttgatgcgcaacatgaatacgctctcgagcaaaatgatcaacatc
acctcggaacaagaggcgccggccgagtcggcgcagcagatgctcgccgagcacgaaaag
gagttggctatttccgacttgaacgacgtcgaacagccccactatgtacccttggatcta
gacatgaattccagacacgcaacggactcggcgaagacggaaaacgccgacaccaccccg
cttctgcccgaagaaacacgccagctctggcttgcgaacgttttcgagcctacagactcc
ggcatcaatctcagtgaaacctacgaacgagcagatgccatcgccaaagccaatgcagac
gtcacggcgttggtgaaacacaatttccgcgtgttcaagctggagcacaacatcaaggac
ccgagcgccgccttgaacttcctccgggaagaagagaagaaagagctcacgacatacaac
atgactatcaccgagtttcttctgcacttctggaacttgtttctcaacggcggcaatccg
gcgcaattgaagaaacttttcacaaatctacgcaactgccagtcgctactagataagctc
gagaagaaaatcaccgaggaactctccaaccacgacctggtgaagctgaatgaaaaacta
cgggagaagcttaccaaagacgtggtcacgtgcctcgctcccctcaacgccggcctcacg
aaagcctgcaacgagtacatggaggcgtaccggaaaagcgacgccgaatccaacggcact
cccgcctctgacggcaacggccctgcaataaacgaaaacggcaagagacctttgcaagtc
tag
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