Clavispora lusitaniae CBS 6936: A9F13_03g02167
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Entry
A9F13_03g02167 CDS
T05147
Name
(GenBank) putative exosome non-catalytic core subunit
KO
K11600
exosome complex component RRP41
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9F13_03g02167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_03g02167
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A9F13_03g02167
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
A9F13_03g02167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
OVF10076
UniProt:
A0AA91Q376
LinkDB
All DBs
AA seq
244 aa
AA seq
DB search
MSRMELYSPEGLRVDGRRWNELRRFECKINTHANSADGSSYIEQGNTKVMCMVHGPKEPS
LRSQSNQNRATIEINLNVASFSTLERKKRNRTEKRMVELKTTLERTFEQSILAHLYPRTL
IEVHVQVLAQDGGMLASITNAITLALVDAGIAMYDYVSAVNVALHDQTPLLDLNTLEEND
MSCLTIGVVGKSEKLAMLLLEDKMPLDRLEAVLGIAIAGGHRIRDLMDEEVRRHGNSRSA
KLTT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaatggaactttattcgcccgaagggttgagggtcgacggccggcgatggaac
gagttgcgccggttcgagtgcaaaatcaacacccatgccaactcggccgacggctcgtct
tacatcgaacaaggtaacacaaaggtgatgtgcatggtccacgggcccaaggagccgctg
ttgcggtcgcagagcaaccagaaccgagcgaccatcgaaatcaacttgaatgtggcgagt
ttctccacgttggagcggaaaaagcgcaaccggacggaaaagagaatggtggagctcaaa
acgaccctcgagcggacttttgaacagagcatcctcgcccacttgtacccacgaacattg
attgaagtgcacgtgcaagtgctagcgcaggacggaggaatgttggccagtatcaccaat
gctataacgttggcgcttgttgacgccggaatcgccatgtacgactatgtttcggccgtg
aacgttgctcttcacgaccagacgccgttgcttgacctcaatacgttggaggaaaacgac
atgagctgcttgaccataggcgtggtcgggaaaagcgagaaattggccatgttacttttg
gaagacaagatgccgttggatcgcttagaggccgttttgggcatagccattgctggcggc
cacagaatacgagatttgatggacgaggaggtccggagacacggcaacctgagactggcc
aagcttactacatga
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