Clavispora lusitaniae CBS 6936: A9F13_05g00176
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Entry
A9F13_05g00176 CDS
T05147
Name
(GenBank) putative transcription elongation factor
KO
K11292
transcription elongation factor SPT6
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_05g00176
03036 Chromosome and associated proteins [BR:
clus03036
]
A9F13_05g00176
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
A9F13_05g00176
Chromosome and associated proteins [BR:
clus03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
A9F13_05g00176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
SPT6_acidic
Tex_central_region
Spt6_S1
SH2
HHH_9
ArAE_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
OVF09236
UniProt:
A0AA91Q1E8
LinkDB
All DBs
AA seq
1432 aa
AA seq
DB search
MSQEFDEEEIRTRDPVDDQNSSEEGDDVMEDSSEEEDDDNDEEAIRKVREGFIVDDDEED
SVEGVKKRRRKHKRRREKETQEETVDDALDEDDLELLRENSGAAPRPSSSKFKRLKRASP
DDDESSETETIQKPKSGLTDFFSDNEDAAEDDRAPGDEERNILDEFEDFIEEDEFSDEEE
ARAHKAQQQRERAKRTGPKLDTSKLSSVDRESLQQLFEVFGNGAEYEWALEAQEIEDEGN
NEQEPTALDEVFEHAELKDRMLTEEDNMIRIIDIPERFQKYRANLNYMDLEGAELEKEKL
WIGKILFTEKQSTFQGPLEAPFFEAVGKVVEFISKDNWEVPFIWAHRRDFLIHTEEIVSP
EGTVKTNVHKLLFEDDLWRIVHLDIEYHSLYEKRVNTEKIIKALSVDDESLNDIESLETM
VAIQDLQDYIHFTYSAELKKIEDSKDQEDAQEEDEDKKGTKKHSKYAIFERIRENVLYDA
VKGFGISAKEFGENVQDQSTKNYEVPYRIHATDDPYESPEDMIGRLVEDDEVLFKDPKNA
LSAVRKTFAEEIFHNPKIRHEVRQVFKNFASVSVALTEKGRNTIDNHSVYADIKYAKDRT
PADLVSKPDVLLRMLEAEANGLIVVKVRTSDYESWYQSIFNCLKSDGTSEISELWNSERD
LALSMAFKRLTSMVSLNTKEDLRRECERLIGVELRTRFLAKVDQAPFTPFGYDKGTKPNV
LALSFGKGDFDSAVVGAFVRDSGKIDEFFKSDNNPSRDRESEEKFSGQLREFFDRTLRNR
KPDVIVVSGYSAATKRLFDIIKNFVMKENLLANVDDLPNISDPPLLPVIWGQDETARLYQ
NSERALIELSDKPTLVKYCVGLARYVQSPLMEYVSLKDDILSLSFYEHQKLLSHDMIKDI
FETVFVDIVNMVGVEINEALRDPQVAQLLSYVAGLGPRKASGLIRNISAKLGTLSTRSDL
IENELSTANIFFNCSSFLNFPYDEGLSVRDSSIELLDATRIHPEDYSLARKMAADALDLD
EEDMAHIEEQGGIIYQLMQEGVSKVDDLNLTAFGKELESNFGKKKYATLQSIKEELVNNY
EELRRSFHLLDSSEVFKMLTGETTESFSRGSIVPVTINRVGKNYRDENAKIKFLRVSTSS
QINGTVEEGYILRDADYVQGQVIQVVVLDVNYESFVASFSTLPEDIEKAGVPTFFKDPLK
WDFALEEEDKQKERAKENTKLARTRNIQHPLFHNFNHKQAEEFLAPQAVGDCVIRPSSRG
QNYLTVTWKVANNLFQHLSVEEVTNSNGKEYIVDRKRYSDLDQMIFQHVQAIAKHVNEMC
RHPKFREGTLGEVNEWLESYTRANPKNSAYVFCYDHKAPGWFLLLFKVNVNTPITTWHVK
TECNGFVLKGFSYPNMMRLCNGFKQTFKSLMNDNSRSARQGQPSSYNGGYGY
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagagtttgatgaggaagagatccgcacgagagatccggtggacgaccaaaat
tcgtctgaagaaggtgacgacgtgatggaagactcttcggaagaagaagacgacgataat
gatgaagaggctatccgtaaagtgagggaaggattcattgttgatgatgacgaggaggat
tctgttgaaggagtcaagaaaagaagaagaaaacacaaaagaagaagagaaaaggaaaca
caggaagaaacagtggacgatgcgttggacgaagatgatttggagcttttaagagagaac
tctggtgcagcacctcgtccatcaagcagcaagttcaagagactcaaaagagccctgccc
gacgatgatgaatcgctggaaactgaaacaatacaaaaaccaaaaagtggtctcacggat
tttttttcggacaacgaagatgcagcggaggacgaccgtgctcctggcgatgaagaaaga
aacattcttgatgagtttgaagacttcattgaagaagacgagttttctgatgaagaagag
gctcgtgctcacaaagctcaacaacaacgcgaacgggcaaaaagaactggtcccaagttg
gacacctccaaattgtcaagtgtcgacagagaaagtttgcagcagttatttgaagttttt
ggaaatggcgctgaatacgagtgggctttagaagcacaggaaatcgaagatgaaggcaat
aacgaacaagagccaactgcattggatgaggtgtttgaacacgcggaattgaaagatcgg
atgcttacagaggaagacaacatgattcgtatcattgacattccggaaagatttcagaag
taccgagcgaacttgaattacatggacttggagggtgcagaattggaaaaagaaaagctc
tggattggcaagattctttttaccgaaaagcaaagtacgttccaagggccattggaagct
ccattctttgaggcggtaggcaaggttgttgaattcatttccaaggataactgggaagtt
cccttcatttgggcacatcgtcgtgatttcttaattcatactgaggaaattgtgagccca
gagggtacggtcaagacaaatgtacacaagttgttgtttgaggacgatttgtggagaatc
gtgcatcttgatattgagtaccattctctttatgagaaaagggtgaacactgagaagatc
atcaaagccttactggttgatgatgaatccttgaatgacattgaactgttggagactatg
gtcgctattcaagatttacaggattacattcatttcacctactcagcggagctcaagaag
atcgaagattctaaggaccaggaggacgctcaggaagaagatgaagataagaaaggcacc
aaaaaacattcaaagtatgccattttcgaaagaatccgtgagaatgtgctttatgatgct
gtcaagggatttggaatctctgctaaggaattcggtgaaaacgtgcaagatcaatccact
aaaaactacgaagtgccttacagaatccatgccactgatgacccatatgaatcacctgaa
gatatgattggtagattagttgaggatgacgaggtgttgttcaaagaccccaaaaatgct
ttgagtgctgtcaggaaaactttcgctgaagaaattttccacaatcctaaaatcagacat
gaagtgagacaagttttcaagaattttgcgtctgtcagcgtggccttgacggaaaaggga
cgtaataccattgataaccacagtgtctatgcggacattaaatatgcaaaagacagaacg
cctgctgatttggtgagcaaaccagatgtcttgttgcgcatgcttgaggctgaagcgaat
ggattgatcgtcgtgaaggtcagaactagtgattacgagagctggtatcaatccattttc
aactgtttgaaatcagacggtacatccgagatttctgagttgtggaactctgagagagac
ttagcattgtctatggctttcaaaagattgacgtcaatggtgtctcttaacacgaaggaa
gacttgcgtcgtgagtgtgagagattgattggcgtcgagctaagaacaagattcttggcg
aaagtggaccaagccccattcactccctttggttatgataaaggaacaaagccaaacgtc
ttggccttgtctttcggtaaaggagattttgacagcgccgttgtgggtgcttttgtgagg
gattcaggcaaaattgatgagttcttcaagtcggacaacaacccttcgagagacagagaa
agtgaagaaaagttttctggtcaattaagagaattcttcgaccgcactcttcgaaaccgc
aaaccggacgtcattgttgtgtcggggtacagtgctgcaacaaaaagactttttgacatt
atcaaaaattttgttatgaaggagaacttgttggctaatgttgacgacttacccaatatt
tcagatcctccattacttccagtaatttggggccaggacgagactgctcggttgtatcaa
aattctgaaagagcgctcattgagctttcagataagccaaccttagtcaagtactgtgtt
ggcttggctcgttacgtacagagcccattaatggagtatgtgtcgttaaaggatgatatt
ttatctttgtctttctacgagcaccaaaagcttctttctcatgatatgatcaaagacata
tttgaaacagtctttgtggatattgtcaatatggttggtgttgagataaatgaggctctt
cgtgatccccaagttgctcaacttttatcatatgtggctggtcttggtccaaggaaagct
tctggattgattaggaacatcagcgcgaagttgggtaccttatcaactagaagcgacttg
attgaaaatgaactttctacagcaaacatctttttcaactgctcttcatttttgaacttt
ccatatgacgaagggttatctgttagagactcctctatcgagttattggacgcaacaaga
attcacccagaagactacagtttggccagaaaaatggctgccgatgctctcgacttagat
gaggaggacatggctcatattgaagaacaaggtggtataatctatcagttgatgcaagag
ggtgttagtaaagtggatgatttgaacttgactgcttttggtaaagagttggagtccaac
tttggcaagaaaaagtatgccactcttcaaagtatcaaggaagagcttgtcaacaactat
gaggagcttaggcgatctttccatttattggacagttcagaagtgttcaaaatgttgacg
ggtgaaacaactgaaagcttctcaagaggtagtattgttcctgtcacaatcaatagagtt
ggtaagaactaccgggatgaaaatgctaagatcaaatttttgagggtatcgacatcttct
caaattaatggtacagtggaggaaggttacattttgcgtgacgcagactacgttcaaggg
caagtcattcaagttgttgttttggatgttaactacgaaagttttgttgcgtctttcagc
accttacctgaagacattgagaaggccggagtacccacgttcttcaaggacccgttgaaa
tgggattttgctttggaagaagaagacaagcaaaaagaaagagcgaaggaaaacactaag
ctcgcaagaacaagaaatatccagcatcctttgtttcacaatttcaaccacaagcaagct
gaggagtttttggcacctcaagctgtgggtgattgtgttataagaccttcatctagaggg
cagaattacttgactgtaacctggaaagtagcgaacaacttgttccaacaccttagtgtc
gaggaggttacgaatagcaacggcaaggaatatattgttgatcgcaagagatactcggac
ttggatcaaatgattttccagcatgttcaagctattgcgaagcatgtgaatgaaatgtgc
cgtcatccaaaattccgtgagggtacacttggtgaggtgaatgaatggttggaatcttac
acaagggcgaaccccaagaacagtgcctatgttttctgttatgatcacaaggccccgggt
tggttcttgttactattcaaagtgaatgtcaacactccaatcacaacgtggcatgttaaa
acagaatgtaacggttttgttttaaagggtttttcgtatcctaacatgatgcgtttgtgt
aacggcttcaagcaaaccttcaagagtcttatgaatgataattccagatctgcaagacag
ggtcaaccatcttcatacaatggtggttatggatactag
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integrated database retrieval system
