Clavispora lusitaniae CBS 6936: A9F13_05g02508
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Entry
A9F13_05g02508 CDS
T05147
Name
(GenBank) putative U3 small nucleolar RNA-associated protein
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A9F13_05g02508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_05g02508
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
A9F13_05g02508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
WD40
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-ProteinID:
OVF09441
UniProt:
A0AA91Q134
LinkDB
All DBs
AA seq
510 aa
AA seq
DB search
MASIKDEEELALEKLVFGDHEGFEANLRKIENLYEYSDEEDEFPPQESDSETDNEDLFFI
DESAGVVAESDDMAVDTEIAAEEEETAWIDSDDEKNSASVTTTRAKKLRQAEDETSLSGA
VYTARLRAQFEKIYPRPSWADNWSSEAKSDDEYLEEAPEDAEVGLNLSGLHALLARTTQY
VQTTHKLLPPNRIDIQRLKDANVARRSRGGIQGMSFHAQQPLLVTGGFDRTLRVYHIDGK
RNPFVSSVHFRDSPFRTVKFSPLGGNAVFAAGRRRYMTRWDLTSGDVEKISRMYGQDKFQ
RSYEYFQVSPSGQWIALLGSSGWCNLVNGVTGQYVRGFRVDGFVSDFAFSADEKFIVVAN
HAGDVWEFDLEAKGTRIIRRWTDPTAVTVTKIAMCGRWLALGTKSGVVNVFDRETFGSGN
PAPMCVVDNLVTAITDLKFTPDGQVLCVSSKSKKDALKLVHMPSGTVFSNWPTSGTPLGR
VTTTEFSPNGQMLAIGNDVGRITLWRLNHY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatcaaagacgaagaggagttggcgctcgaaaagcttgttttcggcgaccac
gagggcttcgaggccaatctccgcaaaatcgaaaatctctacgaatattccgatgaggag
gatgaattcccgccacaggagtccgacagcgaaacggacaacgaggatctcttcttcatc
gacgaaagtgccggcgtggtggcggagagcgacgacatggccgtagacacggagatagcc
gccgaagaagaagaaacggcatggatcgactcggacgacgagaaaaacagcgccagcgtc
accacgacccgggccaagaagttgcgccaggccgaggacgagactagtctctctggtgcc
gtttacacggcgcgattgcgcgcccagttcgagaaaatctacccgagaccactgtgggcc
gacaactggtctagcgaagcgaaatcagacgacgagtacttggaggaggcgcctgaagac
gccgaggtggggctcaacctctctggattgcatgcgctccttgcccgcacgacgcagtat
gtccagaccacacataagctacttccgcctaaccggatcgatattcagcggctcaaggac
gccaacgtggccagacgctcgcggggcggcatccagggcatgagtttccacgcacagcag
ccgcttttggtgaccggcggctttgaccgcacgctccgggtctaccacattgacggcaaa
cgcaatccatttgtttcgctggtgcatttccgcgatctgccgttccggacggtgaagttt
ctgccccttggcggcaatgcggtttttgcagccggccggagaagatacatgacccgctgg
gatctcacgtcgggcgacgtggagaagatcctgcgtatgtacggccaggacaagttccaa
cggtcgtacgagtacttccaagtcagtccaagcgggcagtggattgcgctcctaggcctg
tcgggctggtgcaacttggtgaacggcgtcacgggccagtatgtgcggggattccgtgtc
gacggctttgtgtctgactttgcgttttcggcggacgaaaaattcattgtggtggccaac
cacgcgggcgacgtgtgggagtttgacttggaggccaagggcactcggatcattcgccgc
tggaccgatccgaccgcggtcaccgtcacgaaaatcgccatgtgcggccgctggcttgcc
ttgggaacaaagtccggtgtggtgaatgttttcgatagagaaacgtttggcctgggcaat
ccggcgcccatgtgtgtagtagacaacttggtgacggccatcacggacttgaagtttact
ccagatggacaagtgctctgtgtgtcgctgaaactgaaaaaggacgctttgaaattggtc
cacatgcctctgggaacggtgttttccaactggcccacgagcggaacgcctttgggccgt
gtcaccactacagagttttcgccaaacggccagatgttggctatcggaaacgacgtggga
agaattaccttgtggcgcttgaaccactactag
DBGET
integrated database retrieval system
