KEGG   Clavispora lusitaniae CBS 6936: A9F13_05g02794
Entry
A9F13_05g02794    CDS       T05147                                 
Name
(GenBank) putative RNA-binding protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03018  RNA degradation
clus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    A9F13_05g02794
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A9F13_05g02794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clus03019]
    A9F13_05g02794
   03041 Spliceosome [BR:clus03041]
    A9F13_05g02794
Messenger RNA biogenesis [BR:clus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     A9F13_05g02794
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     A9F13_05g02794
Spliceosome [BR:clus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    A9F13_05g02794
SSDB
Motif
Pfam: LSM SM-ATX RimP_C Hfq KOW7_SPT5 LSM12_LSM
Other DBs
NCBI-ProteinID: OVF09467
LinkDB
AA seq 101 aa
MSTASADREHKNATDENPNGESTVDIPTVLPLEAIDRAIGSNIKILLTNDKEFSGKLVGF
DDFVNVVLEDVVELDSEGNEGKPIKKMLLNGAQIAMLCTSS
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtctacggcaagcgcagacagagaacacaagaatgctactgatgaaaacccaaatggt
gagtctacagtagacatcccaacagtccttccactagaagctattgaccgcgcgattgga
tcaaacatcaagattttgttgaccaacgacaaagagttcagtgggaagttagtgggcttc
gatgactttgtcaatgttgtcttggaagacgtcgttgagttggactctgagggtaatgaa
ggaaagccaattaagaagatgttgttgaatggtgctcaaattgccatgttatgtacgagc
tcttga

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