Clavispora lusitaniae CBS 6936: A9F13_06g01111
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Entry
A9F13_06g01111 CDS
T05147
Name
(GenBank) putative glucose-repressible alcohol dehydrogenase transcriptional effector
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9F13_06g01111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_06g01111
Enzymes [BR:
clus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
A9F13_06g01111
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
A9F13_06g01111
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
A9F13_06g01111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
OVF08982
UniProt:
A0AA91Q1G2
LinkDB
All DBs
AA seq
396 aa
AA seq
DB search
MLALKHLKRVCVHIQQPQRRLSGVSITPEPTPSIYPHSHIKPPPNFDATKFRQWIELSPK
NGKPSISIMTFNLLSQHYVWKKVFGDLDQNYLDWTHYRFPLINQTISQFQCDIMCFQELE
CSVYENSWKSNFPLKNYSSVYMRKPNPKYWGTKPSEFMDGVGVFVNSERFDVVDYYPINY
GNYVSEHPDRFDLTDDVVSRVIPRNTVALILKLWDKQAEKTVYVTNTHLYWSPKFNDVKL
IQTKILLNELARLIGEEENPCIIMCGDYNSTPNSLVFKLLKDGKVKVDTAEEFADFDYGH
KIDGEPLDNEFVKSPFDLTPAYGPLLKDGSPHKLDFTSYSKNLTEVLDHIWFSSATFEAN
RVLGKVEGDYSAQASGFPDRQFPSDHIPLVSEISYI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctagccttgaaacacctaaaacgggtgtgcgtccatatacaacagccacagcgcaga
ctatcgggagtttccataactcccgaacctactccttccatttaccctcattctcacatt
aaaccacctccaaactttgatgctaccaagtttagacaatggattgagctctcaccgaag
aatggtaaaccgtccatctccatcatgacttttaacttgttgtcgcagcactatgtgtgg
aagaaagtttttggtgatttggatcaaaactatctcgactggacccattatcggttccca
cttataaaccagaccatctctcagttccaatgcgacatcatgtgctttcaagagcttgaa
tgcctggtatatgaaaacctgtggaagtcaaacttcccgttgaaaaattatctgctggtg
tatatgcggaaaccgaatccgaaatactggggaacaaaaccttcggagtttatggatggt
gtaggagtgtttgtcaactctgagcggttcgatgtcgtggactactatcctataaactat
ggaaactacgtttccgagcatcccgaccggtttgacttaactgatgatgttgtatctaga
gtgatccctagaaacacggtggcattgattctcaaattgtgggataagcaggccgaaaaa
acggtctatgtgaccaatacgcatctatactggctgcccaagttcaatgacgttaagtta
atccaaaccaaaatccttctcaacgagttggctagacttataggcgaagaagagaaccca
tgtattatcatgtgtggagactacaattccacaccaaatctgttggtattcaaattgttg
aaggatgggaaagttaaggtcgatacagcagaagagtttgctgactttgattatggccat
aagatcgacggcgaaccgctcgataatgagtttgtgaaaagtccgtttgatctcactcca
gcatatggcccgcttttgaaagacgggctgccgcataagttggattttactagctactca
aagaacctaacagaggtattggatcacatttggttttcatctgccactttcgaggcaaat
cgagtgcttggaaaagttgagggagattatagtgcgcaggcgtccggattccctgacaga
caatttccatccgatcacattccattggtttccgaaatctcctacatttga
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