Clavispora lusitaniae CBS 6936: A9F13_07g00638
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Entry
A9F13_07g00638 CDS
T05147
Name
(GenBank) putative SKI complex subunit WD repeat protein
KO
K12601
superkiller protein 8
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9F13_07g00638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_07g00638
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
A9F13_07g00638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
Hira
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
OVF08615
UniProt:
A0AA91T245
LinkDB
All DBs
AA seq
382 aa
AA seq
DB search
MGKQYISTVSAALAHKSDISAVEVTNKYTISVSCDGDVAFWDNKKDDVHTPSEHVVYKNI
DKIGIHHVAVYETVPAGSTTRVTVLAFACFDGAVRIFYYTNDDLDTFTQLDLSDFTSLCW
CPAFYKDPTSAQDFFVVTKADGSVAVHPLNVQESDGAVTVEIRPLAGSLHASNTATSFPN
TLAVSSCDGLCAVGYISGDVVVYNLTSQKALFTFHSTDLQHKGKGSTAIPRALAFSPGGT
LLAVSRDNQSAGSITLYDVKYGENVGSLTGPSHSSKATVGGFAHGGWVTGLSFNGDGSLL
ASCGFDRCVRVWNIESREREATVQLSVSDLDFEPEDSDDSVCSGVAFIKKGVRGGAGGDA
NEGLCVVSFDRGIRWYREAGGI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacaatacatttctaccgtttcggcggccctagcgcataagctggatattctg
gcagtggaagtcaccaacaaatacaccatttctgtctcctgcgacggagacgtggcgttc
tgggacaacaagaaagacgacgttcacacgccgctggaacatgttgtgtacaagaatatc
gacaaaatcggcatccaccacgtggctgtgtacgaaaccgtgcctgctgggctgacgacg
cgtgtcacagtgcttgcgtttgcatgtttcgacggtgctgtccgcatcttctactacacc
aacgacgatttggacacgttcacgcagcttgatctcagcgacttcacgtcgctctgctgg
tgtccagctttttacaaggatccgacttctgcccaggacttctttgtggtgacgaaggcc
gacggcagtgtggctgtgcatccgttgaatgtgcaagaatccgatggagctgtgacagtg
gaaatacgcccgttggccggctctctccatgccagcaacaccgcgacatcgtttccgaac
accttggctgtgtcgctgtgtgacggcttgtgcgctgtcggctacatctccggcgacgtc
gtggtttataacttgactagccaaaaggctctcttcaccttccatctgacagacctccag
cacaagggtaaagggtcgactgcgatcccccgtgcgctagcgttttcgccaggtggcact
cttctcgccgtttctcgtgacaaccagctggcaggctccattactctttacgacgtcaag
tatggtgagaacgtgggctctctcacaggtcccagccatctgtccaaggcgacggttggt
ggatttgcgcatggaggctgggtcacgggactcagtttcaatggcgatggctccttgttg
gctagttgcggttttgaccgctgcgttcgagtgtggaacatagagctgcgtgagcgagaa
gcgacggtgcaactcagcgtctcggacttggactttgagcccgaggatagcgacgactcc
gtgtgttctggtgtggccttcatcaaaaagggagtacgtggaggagcaggaggtgatgca
aatgagggcctttgtgttgtgagtttcgacaggggaatcagatggtatcgtgaagcagga
ggcatataa
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integrated database retrieval system
