KEGG   Clavispora lusitaniae CBS 6936: A9F13_07g01353
Entry
A9F13_07g01353    CDS       T05147                                 
Name
(GenBank) putative polyadenylation factor subunit
  KO
K15542  polyadenylation factor subunit 2
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    A9F13_07g01353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clus03019]
    A9F13_07g01353
Messenger RNA biogenesis [BR:clus03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     A9F13_07g01353
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st eIF2A WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4 PEP5_VPS11_N WD_LRWD1 Beta-prop_WDR11_2nd Beta-prop_VPS8
Other DBs
NCBI-ProteinID: OVF08675
UniProt: A0AA91T266
LinkDB
AA seq 442 aa
MSRYQQSLEQQLQSQEKKGHHRRTVDHGNSMGRWHMQRSLGRTRYHLGAARPESSYLVDV
LPALAYKNDNVAGNAAAFDIQAKFVHLSSNKARHSINAVKWTPEGRRLVVASHSGEFTIW
NGMTFNFETIMQAHDSAVLALRYSHSDEWLLSGDQDGAIKYWQPNYNNVNIVQAHGDAVR
DIAFSPTDSKYVTCSDDSTLKIWSFASGREERVLTGHHWDVKSADWHPTLGLVVSGSKDN
LVKLWDPRTPAAVATLLGFKHTVTKTKFQKAGTARLLASVSRDRSCRVFDLRAMADYTVI
RDHEADLSCVEWHPVHASLLTTAAYDGAMHHYFLDKYVPADVDQSGPASVEAVHRIPYAH
EKAIHALEYHPLGHLLCSAGNDRSARFWSRARPNDPMAFKDPLYTNDKNGAWYYGVNNNV
NAVLEDTSHVVEQERRGIPGLN
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgagccgctaccaacagagcttggagcagcaattgcaactgcaagagaaaaaaggccac
caccggcgcacagtcgatcatggaaatagcatgggccgttggcacatgcagcgcagttta
gggcgcacaaggtaccatttaggcgcagccagacctgagctgtcgtatctcgtggatgtt
ttgcctgcactcgcgtacaaaaacgacaatgtggccggaaacgccgcggctttcgatatc
caggcgaagtttgtgcatctttcgctgaacaaggcgagacatctgatcaatgccgtgaaa
tggacccccgaaggccggcggctagtggtggcgctgcatagtggagagttcaccatttgg
aacggcatgacgttcaactttgaaacgatcatgcaagcacacgactcggccgttctagcg
ttgcgctactcgcattcggacgagtggcttcttctgggagaccaggacggcgctatcaag
tactggcagcccaactacaacaatgtcaacattgtgcaagcgcacggcgatgctgtgcgc
gacattgccttttcccccaccgacagcaagtatgtcacttgcctggacgactccacgctt
aagatctggagttttgcatctggtcgcgaggaacgggtcttgacaggccaccactgggac
gtgaaaagtgccgactggcatccgacattggggctcgtggtgctgggctcgaaagacaac
ttggtcaagctatgggatccacgtacgcctgcggccgtggccacgcttcttggcttcaaa
cacaccgtgacgaaaacgaagttccagaaagctggcacggcgcggcttttggcgtcggtg
tcccgcgatcgcctgtgtcgtgtctttgacttgcgtgccatggccgactacacggtgatt
cgagaccacgaggccgatctcctgtgtgtggaatggcatccggtgcatgcgctgctttta
accacggctgcctacgatggcgctatgcaccactactttttggacaaatatgtgccagca
gatgtggaccagagcgggccagcatcagttgaagcggtacaccgcattccgtatgcgcac
gaaaaggctattcatgcgttggagtaccatccgttgggccatcttttgtgcctggccggt
aacgacaggtctgccagattttggctgcgtgctcggccaaatgaccctatggcgttcaaa
gatccattgtacaccaacgacaagaacggtgcgtggtactatggtgttaataataatgtg
aatgcggtgttggaggacacctcgcatgttgtggagcaggagcgtcgtggtattccggga
ttgaactga

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