Clavispora lusitaniae CBS 6936: A9F13_08g00165
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Entry
A9F13_08g00165 CDS
T05147
Name
(GenBank) putative E3 ubiquitin-protein ligase
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03040
Spliceosome
clus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_08g00165
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
A9F13_08g00165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clus03041
]
A9F13_08g00165
04121 Ubiquitin system [BR:
clus04121
]
A9F13_08g00165
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_08g00165
Enzymes [BR:
clus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
A9F13_08g00165
Spliceosome [BR:
clus03041
]
Complex B
Other components
Prp19 complex
A9F13_08g00165
Complex C
Prp19-CDC5 complex
A9F13_08g00165
Ubiquitin system [BR:
clus04121
]
Ubiquitin ligases (E3)
U-box type E3
A9F13_08g00165
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
A9F13_08g00165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp19
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_THOC3
U-box
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
CCSER
Beta-prop_WDR5
Mann_GBD_bact
zf-Nse
Motif
Other DBs
NCBI-ProteinID:
OVF08333
LinkDB
All DBs
AA seq
473 aa
AA seq
DB search
MLCSLSGETPKEPVVSPKSGAIFERRLIESYLASTGKDPVSDEPLSVQELVPIKTQVPEV
TPPRPPTFNSIPTMLAAFQNEWDALALETYTLRKQLHTAREELSLALYQYDAAVRVAAKA
IRERDEARSALTELSAAFGAQEKQAGGSEKIPVQALNAARDRLFAEHKNQKVTLGVSSSS
NVQFSASIEDLDIDNVAFLSAEPVTQRTIVASTEQCHVLPDGKRLSLPDISETFFLSKSE
EKLPFLVSGQSLVEIDSGSENALGVSAKQIVPHPTEPLLCVLTDKGEWALCDRDNILYKS
ENVPSTAIDLHVDGVLLGVGTASEVLIFDLTSTEQVAAISTKHAHVNKIQFALNGYWLVV
GSSTEDKSAVQIFDLRKNSLVHEIDFDAASDFVLDPSCSVLTTYSNLQLVAHLYVKKGKK
WYDAVSTLSVQPLHALTLNSTAATVQETNTIEIIGLGEKHLCRYTLSLSQESV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctctgttcactttcgggcgaaacgcccaaagagcctgtggtttcgccaaaaagtggg
gcgatcttcgagcgtcgcctcatcgagtcttacttagcttctacagggaaagatcctgtg
tcggatgagccactatcggtgcaagagttggtgccgataaaaactcaagttccagaagtc
acgccgccacgcccaccgactttcaattcgattccaacaatgttggcggctttccagaat
gagtgggatgcgctagctttggaaacttacactttgcgcaaacagctccacactgctcga
gaggaactcagtttggcgttatatcaatacgacgctgcagttcgcgtagcagcgaaagca
attcgggaacgtgatgaagcccgcctggctcttacagagttgtcggccgcattcggtgct
caagaaaaacaagcaggcggaagcgagaaaattccggttcaggcgttgaacgctgctagg
gatcgtctttttgccgaacacaagaaccagaaagtgacccttggcgtgtcctcatcgtca
aacgtccaattctctgcttctattgaagacctcgatatagacaatgtcgctttcctctct
gcggagccagtgactcaaagaaccatagtggcttctacagaacagtgtcatgtactccct
gacggcaagagattgtcacttccagatatttcagaaacgtttttcttatcgaagagcgaa
gaaaaactacctttccttgtgtctggccagtcgttggtagaaatcgattctggttcagaa
aatgccttgggtgtatctgcaaaacaaatcgtgcctcatccaactgaacctctcctttgt
gttttgacggacaagggcgagtgggctctttgtgatagagataatattctttacaagtcc
gagaatgttccttctactgctatagatcttcatgtggatggagttttactaggagtggga
accgcttccgaagttttgatcttcgacctcacttctacagagcaggttgctgctatatct
accaagcacgctcatgtgaacaaaatccaatttgcattaaatgggtattggcttgtggta
gggtcgtccaccgaggataagagtgccgtgcaaatatttgacttgcgtaaaaattctttg
gtgcatgagattgactttgatgctgcatcagattttgtcttggacccatcatgtctggtt
ttgaccacatactccaatctccaattagtggcacatttgtatgtgaagaagggtaagaaa
tggtatgatgccgtatcgactttatccgtgcaacctttgcatgccttgactttgaactcg
actgctgccactgttcaggaaacaaacacaatagaaattattggcttgggagaaaagcac
ttatgccgctacactttatctctctcacaagaatctgtataa
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