Clavispora lusitaniae CBS 6936: A9F13_09g01353
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Entry
A9F13_09g01353 CDS
T05147
Name
(GenBank) putative mRNA 3'-end-processing protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A9F13_09g01353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_09g01353
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_09g01353
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
A9F13_09g01353
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
A9F13_09g01353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCCH_4
Motif
Other DBs
NCBI-ProteinID:
OVF08204
UniProt:
A0AA91PZ99
LinkDB
All DBs
AA seq
211 aa
AA seq
DB search
MIRLNPMIHPDTRNKKFKFENFLRKEYSFGLDPDRPICQFYKPSQPDSCPNGPFCPNKHV
PAMYNNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGYCTQTPECLYLHIDP
QQKIPECSQYEKGFCPEGPKCPNRHIRKIMCPLYLTGFCPKGPDCDYSHPKFDNLPPKLR
VEHKRLIKGETKEVEKISYDQPLTEVVRDRR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctaaatcctatgatacatcctgatactcgcaacaaaaagttcaagttcgag
aatttcctacgcaaagaatacagttttggtcttgatcccgacagacctatctgtcagttt
tataaacctagccagcctgactcttgtcccaatggaccattttgtccaaacaagcatgtt
ccagccatgtacaataacaagattgtttgtaagcattggttgagagggttgtgtaaaaag
aatgaccactgtgagttcttgcacgagtacaatttgagaaaaatgcccgagtgcttgttt
tatctgaagaacggttactgtacccaaactccagaatgtctttatttgcatattgatcca
caacaaaagatacccgagtgtctgcaatatgaaaaagggttttgtcctgagggtcccaaa
tgcccaaatcgtcatattaggaagattatgtgcccgctttatttgactggattctgtccg
aagggccctgactgtgattatagccatcctaaatttgacaacctacctcctaaacttagg
gtggagcataagaggcttataaagggtgaaactaaagaagtcgagaagatttcgtatgac
caaccactcacggaagtcgttagagatagaaggtaa
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integrated database retrieval system
