KEGG   Clavispora lusitaniae CBS 6936: A9F13_10g00374
Entry
A9F13_10g00374    CDS       T05147                                 
Name
(GenBank) putative U4/U6-U5 snRNP complex subunit
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    A9F13_10g00374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clus03041]
    A9F13_10g00374
Spliceosome [BR:clus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    A9F13_10g00374
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 PRP4 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Vps41 NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_IFT140_2nd WD40_RFWD3 DHFR_2 Beta-prop_SCAP
Other DBs
NCBI-ProteinID: OVF07912
UniProt: A0AA91PYQ3
LinkDB
AA seq 476 aa
MAQTFAPVVNDGGKTDRQISLLIPTDDQEVRSELRKLGEPITLFGEGKAERRERLVRLVS
ERKHTNFEFAEVQDDSMDSDEEDEGEEEEEFYTPGDDALLEARKDILAYSIDRAVQRVDK
QRKVSASYNFAQVLRHRRNINSQLKQFEPQGSFTVKGNTRALNGVRINSSNSLVACSSWD
GHVTIFKRDTQESISQAVRSKPGFHTEKATVAWSPSESTTLASAGAEGTLNIWRVDDGSL
TNTYRRDNAHSGRIARTEFHPSGKYLATTSFDLTWKLWDVLRPEKEILEQEGHAKEVFAC
SFHPDGSLLATGGLDAIGHIWDLRSGRTIATLEGHIQGIYSMDWSPNGYHLASGSADCSV
KIWDMRKAHGAELFSIPAHTKIVSDVRFVQNTHSSPLAQPVADENEENTQTLDVSGTYLA
TSSYDGTVKLWSSDNWLHVKSLVGHTDKVMSVDVGKDASCIVSCGWDRTIRLWGKV
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggcccaaacatttgcacccgtcgtcaatgacggcggaaagacagaccgtcagatcagt
ttgctcataccaacggacgatcaagaggtgcgactggagctccgaaagttgggagagcca
atcactctttttggtgaaggcaaggctgaaagaagagagcgtcttgtacggctagtgagt
gaaagaaaacacaccaactttgagtttgccgaagtacaggatgatagcatggacagtgac
gaagaagatgaaggggaggaagaagaagaattctacacaccaggagatgatgcattacta
gaggcacggaaagacatactagcgtactctatcgatagagcagtgcaacgagttgacaaa
caacggaaagtttctgcatcgtataactttgcccaggtgttgcggcacagacgaaatatc
aattcacaactcaaacaattcgagccccagggctcgtttaccgtgaaaggtaatactaga
gcattgaatggcgtccgcatcaacagttccaactctctagtggcatgttcctcctgggat
ggacatgtcaccattttcaaaagagatacacaagaatccatcagccaggcggtgagactg
aaaccgggctttcatactgaaaaggcgacggtggcatggagtccttctgagtccaccaca
ctcgcttcagctggagcagaaggtactctcaacatatggagagttgacgacggctcattg
acaaatacttatcgccgtgacaatgctcatagcggacggattgcgcggacagaattccat
cctagcggaaaatacttggcaacgacatcttttgacctcacctggaaactatgggacgtc
ttgcggcccgaaaaggagattttggaacaagagggtcatgccaaggaagttttcgcctgc
agcttccatcccgatggcagccttttggccactggaggcttggacgctataggccatatt
tgggacttgcgaagcggccgcactattgccacgcttgagggccacatccaaggaatctac
agtatggactggtctccaaatggatatcaccttgccagtggtagtgctgactgttctgtg
aaaatttgggacatgcgcaaagcgcatggagcagagcttttctcgatacctgctcatacc
aagattgtcagcgacgtacgatttgtacaaaacactcattcgagcccattggcacagcct
gtggcagacgaaaacgaagaaaatactcagacgttggatgtgtcgggcacatatctagcc
acaagttcctacgacggtacggtgaagctttggtcgtcagacaactggctccatgtcaag
tctttggttggccacacagacaaggtaatgagtgttgacgtggggaaagatgcgctgtgt
atagtgagctgcggctgggacagaaccatcagattatggggaaaggtatga

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