Clavispora lusitaniae CBS 6936: A9F13_10g00847
Help
Entry
A9F13_10g00847 CDS
T05147
Name
(GenBank) putative exosome non-catalytic core subunit
KO
K03679
exosome complex component RRP4
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9F13_10g00847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_10g00847
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A9F13_10g00847
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
A9F13_10g00847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
DUF2110
Motif
Other DBs
NCBI-ProteinID:
OVF07952
UniProt:
A0AA91T1F8
LinkDB
All DBs
AA seq
355 aa
AA seq
DB search
MDSVITITKPTKRDEIFDQDSDVEMDNVDESLEQDRDLQSSRPNQNASIVTPGELVTDDP
TWMKGHGTYSLGNETYSSVAGNVSRVNRLLSVIPLRGRYEAETGDHVVGRITEVGQKRWK
VDIGCKQDAILMLGSVNLPGGVLRRKNESDELQMRNFLKEGDLLNAEVQSIFSNGSASLH
TRSLKYGKLRNGIFLKVPSSLVIKQKNHSYNFPGNVSIILGVNGHIWLSKTPSEVSSKAN
ASSNKAQASFDTKGSYNPGQGTVSITRLEEESSWEIYSDKNDPDISESIRHTITRYYNVI
KALSACELGITEQRIRMGYEASMMFSDVSSFIDREAQESICRDIINGEKMRGTGA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggatctggttatcacaataacgaaacctaccaagagggatgagatttttgatcaagac
tcagacgtcgagatggataacgtcgatgaatctttagagcaagacagagatttgcagagt
tccagaccaaaccagaatgcttcgattgtgactccaggagaactagtcactgatgatcct
acttggatgaaaggtcacgggacgtactccttgggcaatgaaacatattcctcagttgct
ggtaatgtgtctcgtgtcaacagattattgagtgttataccgttaagaggacgatatgaa
gcagaaactggagatcacgttgtcggaaggatcacggaagtgggacaaaagaggtggaaa
gtggatattggatgtaagcaagatgccattttaatgctcggttcggtgaatttacctgga
ggagtcttgagaagaaaaaacgaaagcgatgaactacaaatgagaaatttcttaaaggaa
ggagatctattaaatgctgaggtacaaagtatctttagcaatgggtcagcatcattacac
acacgttccttaaaatacggtaagttgagaaacggaatctttttgaaagttccttcgagt
ttagtcatcaagcagaaaaatcactcgtataactttcccggaaatgtcagcataattcta
ggtgtcaatggtcatatctggttgagtaaaacgccaagtgaagtctcctccaaagccaat
gcatctagtaataaagcacaagcatcatttgacactaaaggctcgtataatccaggccaa
ggcactgtgtctataacgagattagaagaggaatcatcttgggaaatctacagtgacaag
aacgatccagatatcagcgagagtatcagacacaccatcacaaggtactacaacgttatc
aaggcattaagtgcttgtgaattaggtataacggagcaaagaattagaatgggatacgag
gcaagcatgatgttttctgatgtgagcagttttattgatagagaagcacaggagagcatc
tgccgggatatcatcaatggagaaaagatgaggggaaccggcgcataa
DBGET
integrated database retrieval system
