KEGG   Clavispora lusitaniae CBS 6936: A9F13_11g00891
Entry
A9F13_11g00891    CDS       T05147                                 
Name
(GenBank) putative DNA-directed RNA polymerases I, II, and III subunit
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03020  RNA polymerase
clus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A9F13_11g00891
  09124 Replication and repair
   03420 Nucleotide excision repair
    A9F13_11g00891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clus03021]
    A9F13_11g00891
   03400 DNA repair and recombination proteins [BR:clus03400]
    A9F13_11g00891
Transcription machinery [BR:clus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     A9F13_11g00891
  RNA polymerase III system
   RNA polymerase III
     A9F13_11g00891
  RNA polymerase I system
   RNA polymerase I
     A9F13_11g00891
DNA repair and recombination proteins [BR:clus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      A9F13_11g00891
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF3648 SH3_2
Other DBs
NCBI-ProteinID: OVF07751
UniProt: A0AA91PYJ4
LinkDB
AA seq 213 aa
MDDVERATSRLWRTFRTVKEMVRDKGYYITDEEINMTLDEFKAKICPMGEAQRKLMCFQA
QPTPEAAEKFPEMGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQTSITPSANK
LIPTVSPATIEVFQESDLVVNITHHELVPKHIRLSKPEKKELLDRYRLKESQLPRIQRED
PVARYLGLKRGDVVKIIRRSETSGRYASYRICL
NT seq 642 nt   +upstreamnt  +downstreamnt
atggacgacgttgaaagagctacctcccgtttgtggagaacattcagaactgttaaggag
atggtgagggacaagggctattacattacggatgaggaaatcaacatgaccttagatgaa
ttcaaggcgaaaatctgtcccatgggagaagcacaaagaaaattgatgtgtttccaagct
caacctactcctgaggccgcagaaaagtttccagaaatgggctctttgtgggttgaattc
tgcgacgaagcgtctgtgggaatcaagactatgagaaacttttgtattcacatcagtgag
aagaactttagcacgggtattttcatctaccaaacatccatcacccccagtgccaataag
ttgatcccaaccgtgtcgccagccactattgaggtgttccaggagagcgacttggtggtg
aatattactcatcacgaattggttccaaaacacatccgtttgtctaagccggagaagaaa
gaattgttagacagatatagattgaaggagtcacagttacccagaatccagagggaggac
cctgttgccagatatttgggtttgaagagaggtgatgttgtgaaaatcatcagaagatcc
gaaacctctggtcgttatgcatcctacagaatctgcttgtaa

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