Clavispora lusitaniae CBS 6936: A9F13_11g01122
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Entry
A9F13_11g01122 CDS
T05147
Name
(GenBank) putative RNA-binding protein
KO
K12881
THO complex subunit 4
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03013
Nucleocytoplasmic transport
clus03015
mRNA surveillance pathway
clus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_11g01122
09122 Translation
03013 Nucleocytoplasmic transport
A9F13_11g01122
03015 mRNA surveillance pathway
A9F13_11g01122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_11g01122
03041 Spliceosome [BR:
clus03041
]
A9F13_11g01122
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
A9F13_11g01122
TREX complex
A9F13_11g01122
Spliceosome [BR:
clus03041
]
Complex C
Other components
EJC/TREX
A9F13_11g01122
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
A9F13_11g01122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Arm-DNA-bind_5
KIF9
OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
OVF07772
UniProt:
A0AA91T197
LinkDB
All DBs
AA seq
227 aa
AA seq
DB search
MSTALDKSLDDIISSSRKTKKVQANRKKTVGKAVGKGVGKAQKKQPVVTFKKSKPAAAPK
AATPAIDLTYATKVVAHGLPRDLKQENVKDFFQSQIGGVQTVSMNYNEKGNFKGIATIIF
KSSKNAVLAVEKYNNAPIDGGASKLKLELIIDPTKKPLAARITANKPASAQVAKGQSKKE
QLKQKLNEKRKQLQKKKADAKPKQKPSKPVKKTAEQLDQEMSDYFNN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgctttggataagtctttggacgacattatttcctcctctagaaagaccaag
aaggtccaagccaacagaaagaagactgttggcaaggctgttggtaaaggtgtgggaaaa
gcacaaaagaaacagcctgttgttactttcaagaaaagcaagcctgctgctgcccctaaa
gctgctactccagctatcgacttgacttatgctactaaagttgttgcgcatggcttgcca
agggacttgaagcaagaaaacgtcaaggactttttccaatctcagattggaggtgtgcaa
accgtgtcgatgaattacaacgaaaagggtaacttcaagggtattgccaccatcattttc
aaatcctccaagaatgccgttctcgcagtggagaagtacaacaatgcccctattgatgga
ggagcttccaagttgaagttggagttgattatcgatccaaccaagaaaccattggcagcc
aggatcaccgccaacaagcctgcttctgcgcaagtggctaagggacaatccaagaaggaa
caattgaagcagaagctcaacgagaagagaaagcaacttcaaaagaagaaggcggatgct
aagcccaaacaaaagccttccaaaccagtgaagaagaccgctgagcaattggaccaagaa
atgtccgactacttcaacaactag
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