KEGG   Clavispora lusitaniae CBS 6936: A9F13_11g01122
Entry
A9F13_11g01122    CDS       T05147                                 
Name
(GenBank) putative RNA-binding protein
  KO
K12881  THO complex subunit 4
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03013  Nucleocytoplasmic transport
clus03015  mRNA surveillance pathway
clus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    A9F13_11g01122
  09122 Translation
   03013 Nucleocytoplasmic transport
    A9F13_11g01122
   03015 mRNA surveillance pathway
    A9F13_11g01122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clus03019]
    A9F13_11g01122
   03041 Spliceosome [BR:clus03041]
    A9F13_11g01122
Messenger RNA biogenesis [BR:clus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     A9F13_11g01122
    TREX complex
     A9F13_11g01122
Spliceosome [BR:clus03041]
 Complex C
  Other components
   EJC/TREX
    A9F13_11g01122
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    A9F13_11g01122
SSDB
Motif
Pfam: RRM_1 FoP_duplication Arm-DNA-bind_5 KIF9 OrfB_IS605
Other DBs
NCBI-ProteinID: OVF07772
UniProt: A0AA91T197
LinkDB
AA seq 227 aa
MSTALDKSLDDIISSSRKTKKVQANRKKTVGKAVGKGVGKAQKKQPVVTFKKSKPAAAPK
AATPAIDLTYATKVVAHGLPRDLKQENVKDFFQSQIGGVQTVSMNYNEKGNFKGIATIIF
KSSKNAVLAVEKYNNAPIDGGASKLKLELIIDPTKKPLAARITANKPASAQVAKGQSKKE
QLKQKLNEKRKQLQKKKADAKPKQKPSKPVKKTAEQLDQEMSDYFNN
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctactgctttggataagtctttggacgacattatttcctcctctagaaagaccaag
aaggtccaagccaacagaaagaagactgttggcaaggctgttggtaaaggtgtgggaaaa
gcacaaaagaaacagcctgttgttactttcaagaaaagcaagcctgctgctgcccctaaa
gctgctactccagctatcgacttgacttatgctactaaagttgttgcgcatggcttgcca
agggacttgaagcaagaaaacgtcaaggactttttccaatctcagattggaggtgtgcaa
accgtgtcgatgaattacaacgaaaagggtaacttcaagggtattgccaccatcattttc
aaatcctccaagaatgccgttctcgcagtggagaagtacaacaatgcccctattgatgga
ggagcttccaagttgaagttggagttgattatcgatccaaccaagaaaccattggcagcc
aggatcaccgccaacaagcctgcttctgcgcaagtggctaagggacaatccaagaaggaa
caattgaagcagaagctcaacgagaagagaaagcaacttcaaaagaagaaggcggatgct
aagcccaaacaaaagccttccaaaccagtgaagaagaccgctgagcaattggaccaagaa
atgtccgactacttcaacaactag

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