Clavispora lusitaniae CBS 6936: A9F13_11g02266
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Entry
A9F13_11g02266 CDS
T05147
Name
(GenBank) putative mRNA 3'-end-processing protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A9F13_11g02266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_11g02266
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
A9F13_11g02266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_CcmH_CycH
Med31
TPR_19
Motif
Other DBs
NCBI-ProteinID:
OVF07871
UniProt:
A0AA91PYS9
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MATTTDASGQNRSGVLGQLEDEIAQNPLDHKKWGRLIEHVISKDDEEQVRSVFERYFAIF
KFDARQWSNYINFELNKGEQGKVVDLFAKCLPITDDVELCRTYVSYVRRTNDIITGGERA
RNTVVSAFDFAVDKVGCDIDSFELWNDYLDFYKTWTPATSYEQQQKNDLIRKLYKRCLVI
PNAKIEKMWSEYTKWENEVSSPNVASKFIADLSTEYMEARSWNTEWHSVTKSSIKRRMVA
LSPTNDPNGVLAEQVELWFKWLDLEKKNSLNLKEEELQHRVEYVFKRAISILPFVPEMWY
RYTSFLVSGNEEASRNKCIELLSDALKLNPRSFLLSFQLAEFYEKESAFPKAQGVFDSLI
KILVKDHSLIQLQIEKLKSSKSKSSEMIKKNKLMEKEHGASSDSDEDDDDEPIIQYSESE
ALKLLDLELQLSELNKSVTSVYVNFMALCKRSQGIKEVRAVFKQRKNFKPMGYEFYVENA
LIEFYSDNKKISDKVFDLAMKTFSKDGGFLYAYLEYLILTNSIESLKVFFEMAITNLSKE
ISNDKELLQLSTTNILHQKKRAESLKRNQYFMKKMFRRYIRFASCYLNLDTVLLLEKRYS
SFFPDDDEMSLFIDRYSKPFDGIAKYDLGERVVIGFEDDEMDIEEKENGLPLKKKRKTND
RDNYSPETSNGKYDGGSFNQQMPGNSQQHGFVGNTIYNLLQVLPNAGYFGPLSEHVFNSS
KLVELFGNLTNVPGDS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacgacagatgcaagtggtcaaaatcgatcaggtgttcttggacagctcgaa
gatgagattgcgcaaaacccattagaccataagaaatgggggcggttgattgagcatgtg
atctccaaagacgatgaggaacaagttcgctcagtgtttgaacgttattttgccattttc
aaattcgatgctagacagtggagcaactacattaattttgaattgaacaaaggtgaacag
ggcaaagttgttgatctcttcgccaagtgcctccctattacagatgacgtcgaactatgt
cggacatacgttctgtacgttaggcgaacaaatgatataatcacaggcggcgaacgagcc
agaaatactgttgttctggcgtttgactttgcagtcgataaagtcggctgtgatattgac
agttttgaattgtggaatgactatttagacttttacaagacatggaccccagccacttcg
tacgaacaacagcaaaaaaacgaccttataagaaaactttataaaagatgtcttgttatt
ccaaatgccaagatagaaaaaatgtggtcggaatatacgaaatgggagaatgaagtatcg
tcgcctaatgttgccagcaaattcattgctgacttgtctacagaatatatggaagccaga
tcgtggaatacggaatggcacagcgtgacaaaatcctctataaagagaagaatggtcgca
ttatccccaaccaatgacccgaacggtgtattggctgaacaagttgagctttggttcaaa
tggcttgatttagaaaaaaagaatagcttgaacttgaaagaggaagagcttcagcataga
gtagagtatgttttcaagcgagcaatctctattttacctttcgttcctgaaatgtggtat
cggtatactagttttctcgtcctgggtaatgaagaagcaagcaggaacaaatgcatagag
ctcctttctgatgcattgaagttaaatccccgcagttttctcttgagttttcagcttgct
gagttctatgagaaagaaagtgcattccctaaagcgcaaggtgtatttgatagcttaatc
aaaatccttgttaaagaccattccttaattcagttacaaattgaaaagctcaaatcctca
aaatccaaatcttcagagatgatcaaaaagaacaaacttatggaaaaagaacatggggcc
agtagcgacagcgatgaggacgacgacgatgaacctataatccaatactcagaatcagag
gccttaaaactacttgatttagaacttcaactctcagaattgaacaagctggtcaccagt
gtttatgtaaattttatggctttgtgcaaacgatctcagggtatcaaagaggtcagggcg
gtgtttaagcaacgtaaaaatttcaagcccatggggtatgaattctatgttgaaaatgcc
ttgatagagttttattctgacaacaaaaagatttctgacaaggtgtttgacttggcgatg
aagacattcagcaaggatgggggttttttgtatgcctacttggagtatttaatactcact
aactctattgaaagcttgaaagtgttttttgagatggccataacgaaccttctgaaagaa
atttctaacgacaaggagcttcttcaactatcaacaactaatattttgcatcaaaagaag
agagctgagagtctaaagcgcaatcagtattttatgaaaaaaatgttccgcaggtatatc
cgctttgcttcatgttacctaaacttggacactgtcttgttacttgaaaagcgttatagc
agtttcttccctgatgatgatgaaatgtctttgtttattgatagatacagcaaaccattc
gatggaatagcaaagtatgatttgggagagagggttgtcattggttttgaagacgatgaa
atggacatagaggaaaaagaaaacgggcttcctctcaaaaagaaaagaaagactaatgat
cgcgacaactactcaccagaaacctctaatggtaaatacgatgggggatcattcaatcaa
caaatgcctggaaattcgcaacagcatggctttgttggaaatacaatctacaacttattg
caagtcttgcccaatgctggttactttgggccgctctccgagcatgttttcaatagctca
aaattggttgaattgttcggtaacttgacgaacgttccgggtgattcttga
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