Clavispora lusitaniae CBS 6936: A9F13_12g00297
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Entry
A9F13_12g00297 CDS
T05147
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_12g00297
Enzymes [BR:
clus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9F13_12g00297
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
90S particles
Helicases
A9F13_12g00297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HVO_B0008_N
AAA_22
AAA_19
AAA_11
Motif
Other DBs
NCBI-ProteinID:
OVF07513
UniProt:
A0AA91PYT5
LinkDB
All DBs
AA seq
561 aa
AA seq
DB search
MDIFRILSRGAALKTSKKATSDFGGQKEQKKDIKAEVDRETNFFRHRSDARAEDKDRDSE
KEQKSGIDGKKDASAKSENNNDSDSEEENEGESEGSVTISTPAEAAAFRRRSHSKVSGHD
VPLPIGSFHDLQSRFSMNKHLLRNLLEADFIEPTVVQCEAIPIALHRRDLIACAPTGSGK
TVAFLLPMVQLLVEANLSKNPGVRGLVLAPTNELASQIHVQLQQLTRGFKSVTSALLSRQ
LATRLSDKIVSGEKYSVIVSTPLRLLDMVQGGHLDLSTVEQLVIDEADRMFDRGFVEQTD
ALLAALSNAKLRTSIFSATIPAKVEELANSIMRDPVRVIVGHKEAASSSIDQKLVFTGSE
DGKLLAVRQMIQQGEFKPPVIIFLQSITRAKALFHELVYDRLNVDVIHAERTPAQRDEVI
RRFKNGDIWVLITTDVLARGVDFKGVNLVINYDVPQTAQAYVHRIGRTGRGGKPGKAVTF
FTKEDTLAVRPVVNVMKQSGCEAGYGSWMEHLSRLSASDRRHLRRSEPERAQISTVPKVV
KQKRKRKQEMIEASKRRNGQQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacattttccgaatcttgtcgcggggagcggctcttaaaacaagcaaaaaggccacc
tctgactttggtggccagaaagaacaaaagaaagatatcaaggccgaggtggatcgggaa
accaacttctttcgccatagaagcgatgcgcgagcagaggataaagacagagacagtgag
aaagaacaaaagagcgggatcgatggtaaaaaggacgcctcagctaagagcgaaaacaat
aacgacagtgacagcgaagaggagaacgagggcgaaagcgaaggcagtgtcaccatttct
acacctgcggaggcggctgcgttccgtcgtcgaagccattcgaaagtctctggacacgat
gttccgcttcccattggtctgtttcacgacttgcagctgcggttttccatgaataaacat
ctcttgcgaaaccttcttgaggcggactttatcgaacctacagtggtgcaatgtgaggct
atccctatagctttgcatcgccgcgacttaattgcatgtgcccctacgggtctgggaaaa
acggtggcgtttttgcttccgatggtccagcttctagtagaggcaaatctcagcaagaac
cctggcgtgcgtgggcttgttcttgcccccacaaacgagttggcgctgcagatccatgtc
cagttgcaacagctcactcggggattcaagagtgttacgctggctctcttgtctcgccaa
ttggccactcgtttgtccgataaaattgtgtctggagaaaaatattccgttattgtttcc
acgccgctccgacttcttgacatggttcaaggcggccacttagatctttcgacggtggag
cagcttgtgatcgatgaggctgaccgtatgtttgaccgtggctttgttgagcagacagat
gcgcttttggctgcgctttccaacgctaagttgcgcacatccatcttctctgctacaatc
ccagccaaggtggaagaattagccaactccatcatgcgtgaccctgtgagggttattgtg
ggccacaaggaggctgcatcgtctctgattgaccaaaagttagtgtttactggatcggag
gacggtaagcttcttgcagtgcgccagatgatccaacagggtgagtttaagccgccggtg
atcattttcttgcagtcgattacccgtgctaaggccttattccatgagttggtctatgac
cggttgaatgtggatgttatccatgcggaaagaacgcccgcacaaagggatgaagtgatt
cgccggttcaaaaacggtgatatttgggttttgatcaccacagacgtgctcgcaagaggt
gtggattttaaaggtgttaatctagtcattaattatgacgtgccccaaactgcccaagca
tatgtgcatcgtattggacgtacgggtcgtggtggaaaaccgggaaaagcagtgacattt
ttcacgaaagaggatactttggctgtgaggcctgtggtcaatgtcatgaaacaatctgga
tgtgaagcgggctacggttcttggatggaacacttgagtcgtttgtcagcttccgacaga
cgccatctccggagaagtgagccagagcgggcgcagatcagtaccgttcccaaggttgtg
aaacagaagagaaagagaaagcaagaaatgattgaggcgtcgaaacggagaaacgggcag
cagtga
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