Clavispora lusitaniae CBS 6936: A9F13_12g02211
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Entry
A9F13_12g02211 CDS
T05147
Name
(GenBank) putative DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03030
DNA replication
clus03410
Base excision repair
clus03420
Nucleotide excision repair
clus03430
Mismatch repair
clus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9F13_12g02211
03410 Base excision repair
A9F13_12g02211
03420 Nucleotide excision repair
A9F13_12g02211
03430 Mismatch repair
A9F13_12g02211
03440 Homologous recombination
A9F13_12g02211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clus03032
]
A9F13_12g02211
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_12g02211
Enzymes [BR:
clus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9F13_12g02211
DNA replication proteins [BR:
clus03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
A9F13_12g02211
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
A9F13_12g02211
MMR (mismatch excision repair)
DNA polymerase delta complex
A9F13_12g02211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
divDNApol
DNA_pol_B_2
DNA_pol_B_exo2
RNase_H_2
Ig_M157
Motif
Other DBs
NCBI-ProteinID:
OVF07667
UniProt:
A0AA91T155
LinkDB
All DBs
AA seq
1078 aa
AA seq
DB search
MSQDPTGTKRVWSASQEGAHSLPVASQGLSSQVELTASQQQLLKKVKRPNGTEEPSVFEK
ELLDMTQEAQGIQESRQVWTRPPLPADYTEKDISFQQLDAEEANNGDSTAARFFGVTEEG
HSVLCNVTGFLHYFYVPVPKGFMRDSHLARFTSHMKENYYGIHDIEIVLKESIWGFNNNM
KTPFFKVVVKNAREITKIRGAFERGEISFENFFPQNNVTYDNINYLLRMMIDCKITGMSW
ITLPKGAYTLVAPELKVSTCQVECSIDYKDLVSHAPEGEWLKMAPLRIMSFDIECAGRKG
VFPEAQLDPVIQIANVISKHGESRPFVRNVFTVNTCSPIIGSEIFSHAKEEDMLMAWRKF
VVKADPDVLIGYNTSNFDLPYLLDRAKALGLPKFPYFGRMFNIKQEAKDAVFSSRAYGTR
ENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQEGTAET
RRRLAVYCLKDAYLPLRLLEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFRKCL
EENIVVPNMRSEGSNEEYEGATVIEPIRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLN
KQSIKAFQLTEDDYTLTPNGDYFVKSNKRQGLLPAILNELLTARKKAKNDLKNEKDPFKR
DVLNGRQLALKISANSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNVVQEQYCTKN
GYDYDAQVIYGDTDSVMVKFGHSDLETCMKLGEEAANYVSTKFKKPIKLEFEKVYFPYLL
INKKRYAGLYWTRPEKADKMDTKGIETVRRDNCRLVQNVITKVLDYILEERNVEKAELFV
KQTIADLLQNRVDLSQLVITKAYSKHEYDGKQAHVELAKRMKKRDPGSAPALGDRVAYVI
VNSASQKNYEKSEDPLYVLENSLPIDVKYYLENQLSKPLMRIFEPILGERKAKELLAGAH
TRTIKMSAPKSGGLMRFAKKAELCKNCKSPLKPGNKGALCENCVSKAPELYCDALAQMNY
LENKFSRLWTECQRCQGSLHQEVLCSNKDCPIFYMRKKAQKDTFQQAEELRKWDETIW
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatcccacaggcaccaaaagggtttggctggccagtcaggagggggcacat
tcgcttccagtggcctctcaaggtttaagctcgcaagtcgaactcactgcatctcagcaa
cagctcctcaaaaaggtcaagagaccaaatggcacagaagagccgctggttttcgaaaaa
gagcttcttgatatgacgcaagaagcacagggtattcaggagagccgccaagtatggaca
agaccgccgctacccgcagattacacagagaaggatatatcctttcagcagttggatgca
gaggaggcaaataacggtgattcgactgcagcccgctttttcggtgtgacagaagaaggc
cactcagtattatgcaatgtgacaggctttttgcattatttttacgttcctgtgcccaaa
ggattcatgagagatagccatttggcacgttttacaagtcatatgaaagaaaactattat
ggcatccacgacatcgaaattgttttgaaggagtcgatctggggttttaataataacatg
aaaacaccgttttttaaggttgtggttaagaatgctagggaaatcaccaagatcagaggt
gcttttgaacgaggcgagataagctttgagaatttcttccctcagaataatgtcacatac
gacaacatcaattacttgcttcgaatgatgattgattgcaaaatcacaggtatgtcatgg
atcactcttcccaaaggcgcttacacacttgttgctcccgagctaaaggtatcaacatgc
caggtggaatgttcgatagattacaaagacttggtttctcatgctcccgagggcgaatgg
ctcaagatggctcctttgcgtataatgtcattcgacatagaatgtgctggtcgaaaaggt
gtatttccagaagcacaacttgaccctgtgattcagattgcgaatgtgattctgaagcat
ggtgaatcacgcccatttgttagaaatgtcttcacagtgaatacctgttcaccaattatc
ggttctgagattttttctcatgcgaaagaagaagatatgctcatggcttggagaaaattt
gtggtgaaagccgacccagatgtgcttattggatacaatacttcaaattttgatcttccg
tatcttttggatagagctaaggctcttggccttcctaagtttccatattttggaagaatg
ttcaatatcaaacaagaggcgaaagacgcagtgttcagctctcgtgcatacggtactaga
gaaaataaagttgtcaacatcgacggaagaatgcaattggatcttttgcaatttattcaa
agagaatataaattgagatcctatacattgaactctgtttcggctcatttcttaggtgag
cagaaagaagatgtgcaacattcgatcattacagatttacaggaaggtactgcggaaact
agaagacgcttagctgtctactgtttaaaagatgcgtatttgccgttaagattactagag
aaattgatgtgtttggtcaactataccgaaatggccagagtcacaggagttcctttctcc
tatcttctagcaagaggccagcagatcaaggtcatctctcagttgttcagaaagtgtttg
gaggaaaatattgttgttcccaacatgagaagtgagggatcgaacgaagaatatgaaggt
gctaccgtcattgaacccataagaggatactatgatgtgccgatcgcaactttggatttc
agctctttgtatccgtccatcatgatggctcacaacttgtgttatacaacgttgcttaac
aagcagtctataaaagcgttccagttgacagaggatgactatactctcactccgaatggt
gattactttgtgaaaagcaacaagagacaaggtctattgcccgcaattcttaatgagttg
ttgactgcgagaaagaaggccaagaacgatttgaagaatgagaaagatccatttaaaaga
gatgtgcttaatggtaggcagttggcattgaagatttctgcaaactcggtttatggtttc
actggtgcaactattggcaagttaccctgtttggccatctcatcatctgttacagccttt
ggaagagagatgattgaaaaaacaaaaaatgttgtccaagaacaatattgtacaaagaat
ggatatgattacgatgcacaagttatttacggtgataccgattcagtcatggttaaattt
ggccattctgatttggaaacttgcatgaagctaggtgaagaggctgccaattatgtttcc
acaaagttcaaaaagcccatcaaattggagttcgaaaaagtatactttccatatctcttg
attaacaaaaagagatatgctggattgtattggacacggccagagaaagccgataaaatg
gacacgaaaggtattgaaacagtgagaagagacaattgtcgtttagttcaaaacgtcatt
accaaagttcttgactacattttagaggaacgtaatgttgaaaaggcagaattattcgtg
aagcagactattgcagatcttctacaaaacagagtcgatttatctcaattggtgattacc
aaagcgtactccaaacatgaatatgatggtaaacaagctcacgttgagttagctaaaagg
atgaagaagagagatcctggttctgcacctgctttgggtgaccgggtggcatatgtcatc
gtcaattctgctagtcagaagaactatgaaaaatcagaagatcctttgtatgtcttggag
aactctcttcccatcgacgtcaagtattacttggaaaaccagctctctaaacctttaatg
agaattttcgagcccattcttggagaaagaaaggcaaaggaactattggcgggagcacac
acgaggacaatcaaaatgagtgctccgaagagcggcggattaatgagattcgccaagaag
gccgagctttgcaagaattgtaagtcgcctttgaaaccggggaacaaaggtgctctttgt
gaaaattgtgtctccaaagctccagaactttactgtgatgctttagcgcaaatgaattat
ttggagaacaaattttctcgtttgtggacagagtgccagagatgccaaggatcgttacat
caagaagttttgtgttctaataaggattgtccaatcttctatatgcggaaaaaggcacaa
aaggacacattccagcaagcagaagagctcagaaaatgggatgagacgatctggtaa
DBGET
integrated database retrieval system