Clavispora lusitaniae CBS 6936: A9F13_13g01001
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Entry
A9F13_13g01001 CDS
T05147
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_13g01001
03041 Spliceosome [BR:
clus03041
]
A9F13_13g01001
03036 Chromosome and associated proteins [BR:
clus03036
]
A9F13_13g01001
Enzymes [BR:
clus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9F13_13g01001
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
A9F13_13g01001
mRNA cycle factors
Common to processing body (P body) and stress granule
A9F13_13g01001
Spliceosome [BR:
clus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
A9F13_13g01001
Chromosome and associated proteins [BR:
clus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
A9F13_13g01001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
OVF07398
UniProt:
A0AA91T0P2
LinkDB
All DBs
AA seq
614 aa
AA seq
DB search
MNNLSVNGSGENASSGKSQYVPPHLRNRQGSRQPSSGRDFSDSDSGFGGRRSGGFSNGGG
YNSGRRSNGFGGGRDFGGRSGGRGPRVGEGSWVDGKHVPAAKNERMEIELFGTPEDSSFQ
SSGINFDNYDDIPVEATGEGVPEPITSFEAPPLDPLLVENITLSRFTKPTPVQKYSVPIV
CNKRDLMACAQTGSGKTGGFLFPVLSECFMSGPAPQPEPTGAFSFNKVYPTILIMAPTRE
LVSQIFEEAKKYCYRSWVRPAVAYGGVDIGQQIRTLQRGCDLLVAAPGRLTDLLERGRVS
LCNVKYLVLDEADRMLDMGFEPQIRHIVQECDMPDVQDRQTLMFSATFPRNIQMLARDFL
KDYVFLSVGRVGSTSANITQKVLLVEDDEKRSVILDLLSAADNGLTIVFTETKRMADYLA
DFLYDQGFPATAIHGNRTQYEREKALAAFKNGTAPILVATAVAARGLDIPNVSHVINYDL
PSDIDDYVHRIGRTGRAGNTGIATSFFNRNNKNIVKDMIALLSEANQEIPDFLVKISRES
SFGGARGGARGRGSMGGRPGGSRDFRRQGGGGYGGSSASSWGSSNSNNWGSDNSSSRGGY
SSNYGNQSQSTSWW
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctttcggtgaacggctcaggcgaaaatgcttcctccggaaaatcccaatat
gttcctccacacctcagaaacagacaaggttctagacaaccatctagcggccgtgatttt
tctgactctgattcaggatttggtggccgccgttcaggcggtttcagcaacggcggcgga
tacaactctggacgtcgttccaatggctttggtggcggtagagacttcggcggcagaagc
ggtgggagaggtccccgtgttggcgaaggttcttgggttgatggcaaacacgtgccagca
gccaaaaacgagagaatggagatcgagttgttcggcacaccagaagactcttcgttccaa
tcctccggtatcaactttgacaactacgacgacatcccagtggaggctactggagagggt
gtcccagagcccatcacttcttttgaagctccaccattggacccattgttggttgaaaac
atcactttgtccagatttaccaaacctactcccgtgcagaaatactccgtgcctattgtt
tgcaacaagagagatttgatggcatgtgcccaaacaggttccggtaaaacaggtggtttc
ttgttcccagttttatctgagtgtttcatgagcggtcctgctcctcaaccagagccaact
ggagctttctctttcaacaaggtttaccctactattttgattatggctcccaccagagaa
ttggtttcccagatcttcgaggaagccaagaagtactgttacagatcctgggtccgtcct
gccgttgcttacggtggtgttgacattggacaacaaattagaactttgcaaagaggatgt
gatttgttagttgctgctccaggtcgtttgactgacttgttggaaagaggccgtgtatcc
ttgtgcaacgtcaaatacttggttttagatgaagccgacagaatgttggatatgggtttt
gaaccacagatcagacacattgtccaagagtgtgacatgccagatgttcaagacagacaa
acattgatgttctctgccactttcccaagaaatatccaaatgttggctagggactttttg
aaggattacgttttcttgtctgtgggcagagtcggttcgacttccgctaacattacccaa
aaggtgttgttggttgaagatgatgaaaagagatctgttatcttggacttgttgagcgct
gctgacaatggtttgaccattgtgtttaccgaaactaagagaatggctgactacttggct
gatttcttgtacgatcaaggattcccagccactgctatccacggtaacagaacccaatac
gaaagagagaaggctttggcggcattcaaaaatggtactgctccaatcttggttgctacc
gctgttgctgctagaggtttggatattccaaacgtcctgcatgtcatcaactacgacttg
ccaagtgacattgatgactatgtgcatagaattggtcgtaccggtcgtgctggtaatact
ggtattgccacttctttcttcaacagaaacaacaagaacatcgtgaaggacatgattgcc
ttgttgagtgaagccaaccaagagattccagacttcttagtcaagattagcagagaatct
tccttcggaggcgcccgtggtggtgcccgtggccgtggtagcatgggtggaagaccaggt
ggatctagagactttagaagacaaggtggtggtggatatggtggatcttctgcaagctca
tggggcagcagcaacagcaacaactggggcagcgataacagcagctctagaggtggttac
tcttctaactacggtaaccagtcccaaagcacttcctggtggtag
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