Clavispora lusitaniae CBS 6936: A9F13_14g00616
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Entry
A9F13_14g00616 CDS
T05147
Name
(GenBank) putative pre-mRNA-splicing factor
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_14g00616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_14g00616
03041 Spliceosome [BR:
clus03041
]
A9F13_14g00616
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
A9F13_14g00616
Spliceosome [BR:
clus03041
]
Complex B
Other components
Prp19-related factors
A9F13_14g00616
Complex C
A9F13_14g00616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
Suf
ARM_TT21
TPR_17
GET4
DUF4472
Mad3_BUB1_I
Motif
Other DBs
NCBI-ProteinID:
OVF07230
UniProt:
A0AA91PXM2
LinkDB
All DBs
AA seq
790 aa
AA seq
DB search
MDIASLVDPQNVHYEESLLKDPDNESLWLDYFESVQDDFRKSQFVLHRAVTQLPASTLLW
NAYFSLPWTPADNEKLLSLYELALSVLNPTPSLWLRYLTLAMESSPAEAVDFSFNKALMS
LDEQYHGPIWTKYLAFADAVRGKLGASIYRRFFAVCDRFSDGPDITADVCILQIARFGEI
SSTKKLFNQLWEKKYRLSHLLSSVVLEYCKILRYDKNFDDTEYFESVVDKALLSFSDMGP
EFHLELASYYVSRKEFEKAHHQFQLGLNSADSVKQMTYLFSAYADFQHNELTQSGLPEEQ
LMLRLDIYERFLDNSSRLVNDVHLKKNPNNVDYWLDRAQLYEQANDKNQMLSTLVKAITS
INPLKTTSTRGKSLVDLWKVYANVYICQNDFETANIIFSKAIKSQFKTPEELAEIYITWT
ETLLQSYDDNVALENLERVLFADSDDVDYEDSSISVQRRLHKCTKLWEFYFDLLKSIFQD
DNDESILQKWSNAFDRMKSLKIISIRVVLDFADFLQEQKLWERSFSIYETGLSCFNAPQA
KYEIYKRYISRVLSYDRSNKEKIRDLFDHCISHHDIPGYLAKSIYEMYSEFEMQNGSIVK
SKNIIQQGISHLTSSFNSNTKRYTKRQLNQIADDKFELYKKLLSLTSDLKDADLQREVYS
ESIQDIHLSFSHVIDLGMEFISFEVKNNELHRVRALFKHLVGLRSPENPIMSTVWQQWET
FEVQNGNEASFKDMLRLRRRLIQESTERDTARDELNPMGFVKSLSTGNGSANAKSTEVSD
PNAIELDMDV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggacattgcctcacttgtggatccgcagaacgtacattatgaggagctgttgctaaag
gatccagacaacgagtcgctctggcttgactacttcgagctggtccaggatgatttccgc
aagtctcagtttgttctacatcgtgctgtcacccagctcccagcctccacgctcttgtgg
aatgcctatttcctgcttccttggacaccagcagacaacgagaagcttctctccttgtac
gagcttgccttgctggtgttaaaccctacgccttctctatggttgagatacctcactctc
gcgatggagtcatctccagctgaagcagttgacttttccttcaacaaagcgctcatgagt
ctagacgagcagtaccacggacccatttggacaaaatacttggccttcgccgacgctgtg
agaggaaaactcggcgcttcaatctatagacgctttttcgctgtttgtgatcgcttctcc
gatggaccagacatcacggcagacgtgtgtattctccaaattgccaggtttggcgaaatc
agctccacgaagaaactcttcaaccagttgtgggaaaagaagtatcgtttgtcccacctt
ctaagtctggtggtgttggagtactgcaagattcttaggtatgacaaaaatttcgacgac
acagaatattttgaatctgtggttgataaggctctcttgagctttctggatatgggaccc
gagttccacttagaactagcatcttattatgttctgcgaaaagagtttgaaaaggcacat
catcagtttcaacttggccttaactcagcagactctgtcaaacaaatgacatatttattc
agtgcatatgctgattttcagcataatgagcttacgcaatctggacttccagaggagcaa
ctaatgttgcgattggatatatacgaaagatttctcgacaacctgtcccgactcgtgaat
gatgtccatctcaagaaaaacccaaataatgtggactattggctagatcgagcacaatta
tatgagcaagcaaacgataaaaatcaaatgcttagcactttggtcaaagctattactagc
attaaccctttgaaaaccacctctacccgtggcaaaagtctagtggatttatggaaagta
tatgcaaatgtctacatttgccagaacgattttgagacagctaatattattttttcaaag
gccataaagtcgcagtttaaaacacctgaagagcttgcggaaatatacataacatggact
gagacactattgcaaagttacgacgataacgttgccttggagaatttggaacgtgttctt
ttcgcagacctggacgatgttgattatgaggattcttccatatcggttcagcgcagattg
cataaatgcacaaagctctgggaattctatttcgacctcttgaaatctatatttcaagat
gataatgacgaaagtattcttcagaaatggagtaatgcttttgaccggatgaaatccctt
aaaatcatctccatcagagtggttctcgattttgcagattttttacaagaacaaaaatta
tgggaacgttccttttcaatttacgagacaggattatcatgttttaatgcccctcaagca
aagtatgagatatacaagcgatacatctcgagagtgctctcatatgataggtcaaacaag
gaaaagatacgggatcttttcgatcattgcatatcccatcacgatattcctggctacctt
gcgaaatcaatttatgaaatgtactctgaatttgaaatgcaaaacgggtcaattgtgaag
tcgaaaaatatcatacagcagggcatatctcaccttacttcatcattcaattcaaacacc
aagagatacacaaaaagacaactcaatcaaattgcagatgataagtttgagctatacaaa
aaactactttctttgacgtcagacttgaaggacgcagacttacaaagagaagtgtactcc
gaatctattcaggacatccatttatcattttctcatgttattgacctcggcatggaattc
atctcttttgaagtcaagaacaatgagcttcacagagtgcgtgctttatttaaacatctt
gttggtctccggagccctgaaaaccccatcatgtctacggtgtggcaacaatgggaaacg
tttgaggtacagaacgggaatgaagcttctttcaaggatatgcttcgactcaggcggaga
ctcatacaagagtcaacggagcgtgatacagctagagatgaattgaatccaatgggcttt
gtcaaaagcttgagcacaggaaacggaagcgcaaatgcaaaatctacagaagtgagcgat
cccaatgcaattgaattggatatggatgtatag
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integrated database retrieval system
