Clavispora lusitaniae CBS 6936: A9F13_16g00110
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Entry
A9F13_16g00110 CDS
T05147
Name
(GenBank) putative chromatin modification protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A9F13_16g00110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_16g00110
03036 Chromosome and associated proteins [BR:
clus03036
]
A9F13_16g00110
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
A9F13_16g00110
Coactivators
SAGA/TFTC/STAGA complex
A9F13_16g00110
Chromosome and associated proteins [BR:
clus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
A9F13_16g00110
STAGA complex
A9F13_16g00110
TFTC complex
A9F13_16g00110
SAGA complex
A9F13_16g00110
SLIK complex
A9F13_16g00110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
LisH
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR19_1st
ARMC9_LisH
Motif
Other DBs
NCBI-ProteinID:
OVF06919
UniProt:
A0AA91T0A7
LinkDB
All DBs
AA seq
744 aa
AA seq
DB search
MAQNPNTSSSISPPTGSAAASADANSAQQKAQPRGGQQQYTQADLNRIVMEYLNKKGFHK
TEAMFRLESSNAPTPAVPAPSPATTSMAGPGEISKKNDKADPELKELRDKVLRTERELRE
TKDRELHLSKEKELRALKDEEEKQRRENDPDIYYRAYSILRGWVETSLDLYKPELSRLLY
PLFVHCFLELVAKGHVKNAKIFLDKFQDDHRIFHGLEIQQLAGISLPEHLRENRMAQAYR
SNKYRILVSKTTMNLLLYFLHENEAVGGTVLIRIINQYLNPIISTTRPDKIDQEGASNPA
EGIPGYIASTNEVDKFNEQPVLLGKMPLDADVEKEVEAELKVKDETTEKVNGKSLVEEFA
QMAAPDDDSPAPDSLPLPMKDASDIRRMILAVEDSRSKMRLGAIQAAAPSVCMYTFHNTN
NGMTCMEFNQDCNLVAGGFNDSFIKLWSLDGRPLRSVVKRDPANGDNTRRLVGHSGPVYG
MSFSPDNRYLISASEDKTARLWSLDTYTSLVSYKGHNQPVWDVKFSPLGHYFATASHDQT
ARLWATDHIYPLRIFAGHINDVDCVEFHPNSSYVFTGSSDKTCRMWDVHTGHAARVFIGH
TGAVNCMAVSPDGRWLASAGEDSVVNIWDAGSGRRLKSMRGHGRSSIYSLAFSRDGSVLV
SGAADNSVRVWDVRRSTDDAGPLPEAFADAGNNSTLAPEGKAEKRKEIVATPDHMTAYFT
KKTPVYKVHFSRRNLCLAGGVLTV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaacccaaacaccagcagtctgattctgccgccgacaggcagtgctgcagcg
tcagcagacgcaaattctgcccagcagaaagcccagcctagaggcggccagcagcaatac
acacaggcagacttgaaccggattgtcatggagtacctcaacaaaaaagggtttcacaag
acagaggcaatgtttcggttggagagctccaatgcacccacaccagcggtaccggcaccg
tcgcctgcaaccacgtcgatggccggccctggcgagatctccaagaaaaacgacaaggcc
gaccccgagttgaaagagctccgcgacaaggttcttcgaacagagcgggagttgcgcgaa
acgaaagatcgcgagttacacttgtctaaagaaaaggagttgcgtgcgttgaaggatgaa
gaggagaagcagagacgagaaaacgaccccgatatctactatcgcgcatacagcatctta
cgtgggtgggtggagacgtcgttggacttgtataagcccgagttgctgcggttgttgtat
ccgttattcgtgcattgcttcttggagttggtggccaagggccatgtgaagaatgccaag
atcttcttggacaaattccaagacgaccatcgcattttccacgggttagagatccagcag
ctcgcaggaatctcgttgccggaacacttgcgggaaaacagaatggcacaggcgtaccgc
agcaacaagtaccgtattctagtgctgaaaacgaccatgaacttgcttctctactttttg
cacgagaatgaggctgttggcggcaccgtgttgattcgcatcattaaccagtacctcaac
ccaatcatttccaccacgcggcccgataaaatcgaccaggaaggtgcatcgaacccggct
gaaggaattccgggctatatcgccctgaccaacgaggtggacaagtttaatgagcaacct
gtccttcttggcaagatgccgttggacgctgacgttgaaaaggaggtggaggctgaactc
aaggtcaaagatgaaaccacagagaaagtgaacggtaaatcactagtggaagagtttgca
cagatggcggcgcctgacgacgattctcctgcgcccgattccttgccgttgcccatgaaa
gatgccagcgacatccgccgcatgattcttgcggtggaagacctgcggtcgaaaatgcgc
ttgggtgctattcaggcagcagcaccttctgtgtgtatgtacacgttccacaacaccaac
aacggcatgacatgcatggaattcaaccaggactgcaacctcgttgctggaggtttcaac
gacagcttcatcaagctctggagtcttgacggccggccgctccgactggtggtcaagcgc
gacccagccaatggcgacaacacacgacggttagttggccacagcgggcccgtttacggt
atgtcgttttcgcccgacaaccgctacttgatttcagcctctgaagacaagacggcgcgc
ctttggtcgttggacacttacacgtcgctagtgtcgtacaagggccacaaccagccggtg
tgggacgtgaagttctcgccacttggtcactactttgccacagcgtcgcacgaccaaacg
gcccgtctctgggccacagaccacatctacccgttgcggatctttgcgggccacatcaac
gacgtggactgcgtggagttccatccaaacctgagctacgtgtttacgggctcctccgac
aaaacctgccgcatgtgggacgtccatacgggccacgcggcacgcgttttcattggccat
actggtgcagtcaattgcatggctgtgtcgcccgacggccgctggcttgcaagcgcaggc
gaagacagcgtggtcaacatctgggacgcaggctctggccgccgtctcaagtccatgcgt
ggccacggacggctgtcgatctactcgttggcgttttcgcgcgatggcagtgtgttggtg
agcggcgcagcagacaactctgtaagggtgtgggacgtgcggcgcagcaccgacgatgct
gggccacttccagaggcatttgcagacgccggaaataatagcacgctagcgccggagggg
aaggcggagaaaaggaaggagatagtggctactccggaccacatgaccgcgtacttcacc
aaaaagacgcccgtgtacaaggtgcacttctcgcgccggaacttgtgtcttgcggggggc
gtgcttacggtctag
DBGET
integrated database retrieval system
