Clavispora lusitaniae CBS 6936: A9F13_17g00429
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Entry
A9F13_17g00429 CDS
T05147
Name
(GenBank) putative rRNA biogenesis protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_17g00429
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
90S particles
Other 90S particles
A9F13_17g00429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
TPR_14
TPR_19
UTP6_C
TPR_CcmH_CycH
Nop14
Motif
Other DBs
NCBI-ProteinID:
OVF06830
UniProt:
A0AA91T0B0
LinkDB
All DBs
AA seq
1677 aa
AA seq
DB search
MDSSSKSVLSSSEVAFPRGGGSVLTPLEMKTISNKATEDVLFEQAQASKRSGGSTSHPAK
KRKKQSKTPVSKTETEEKGISVDHMTLKNLIPGCEVLGQIVRVDKMDLVLAITDNLVGRV
PITAIGAEVSAMLEKYEAAMDSSDEEDDEPTQSFAPEFPKLASLFEPGQWLRAIVTPTPE
GQRGLHLSIAPSNVNASMEADDFTPGNIVQASVKSIEDHGVVLDLGVGKLSGFLSKKELK
KADIPLSSFTVGKVILTSVASAAARTVSLRPAEKENVSKKTVVTTISSIDAVHPGTLVNA
IIAELSDDGVAARLFGMVDASFTLPHVEEYALEKLKNSFGIGSTVRARIIGTLLQNGTKK
FILSRATAPLALQPELDSSALEAFPVGFIFDSGIEVVGADSDFIYLSTGSHMAQVHKSQV
DPELDPNMNYPVGSKHNARVLGYNRIDNLLVVTLNPKLIASKFVSADDVPVGEYIPSVEI
IKILDEAKGMIVKIFGDFEALVPANHMSDIKLVYPERKFKVGGKVKGRVLYKNGKKLFVT
LRKSLVNMEDDAIVSDIENVVVGFKTTAIVDRFVPGGALVTFFGKLRAYLPKSEISETFV
EEAKDYLKLGQAVTVRILSVNAEENKISVTLRQSTELSNKQIEHLESISIGRTLVEANIV
EKTKEAVIIELEGSNLRGVISTNHLSDGNYEENRIIYKNLEIGGSIEVLVLEKDIRARTV
IASAKKSLITAARTETLPVHYEDIHVGSMVPGYIKSVTNLGLFVSFGGRLTGLVLAKNAT
NDPTEDLSSKFYKNQSVVCDVIKTDDDNKRFLLSLTSSDSAGAFESSKLSNPVDAQMKSK
TDYAVGVSTFGVIDSIEPGYLKIRLADNLEGRVEANQCIRSWKSIKDPKNPLASFTVGEK
VPVKVLGTYDYKWHSFTTAAAFKKTTVLSLTTAKDQLKSKSPYKPDQLSDITVGSEYVVY
IERFHNGTAKVSLTPSIKGEISVYNLSDDMSKYSKFDESFPLGTALKANVIGIDFEHGMV
KLSARKQNLTSFTQLKVGDQYPAKVFKVTKSFVLVELAPGLVGYSYITDALDDYDLKLEE
TYHINQPVAVTITETLENEGKFSVSLRNEKTAKDKPVNSISELHRGDVVKGFIKAINNAG
LYVSLGRDLFALVPVSNISDAFLVDWKKFFKPFQSIVGKIVQCKVEGRITMTLKESELNG
HLADYKTFDELEIGEIYDGTVKKVADYGVFVKLDGTAVDGLCHRSEIADNQVENAAALFA
EGDRVKVKILKIFKDKKQLSLGMKASYFTEADENSDDVEMAEASDDDDEEEVNSEDEVMA
EGFSDNDQSSDSEDEEEESGKEGTDAAPTGLSGLSTNGFDWTASILDQAEDNESSSDEDE
DFTESHKKRKRKGKKNVEDKTSEINARAPESVQDFERMIIGNPDSSILWMNYMSFQLQLG
EIDKSREIAERALKTINYREEQEKMNIWIAILNLENSFGSEESLDAAFKRAVQHMDSLTM
HQKLIGIYQLSEKFDKADELYRVMTKKFAKNVNVWVSFGSSLMDRKLFDDAHELLARALQ
SLPKSSHIDVVRKFAQLEFAKGDPEQGRSLFEGLVTDAPKRIDLWNVYIDQEIKQGDREK
IVSLFERVVTKKLSRKQAKFFFSKWLGYEEEHGSEQSASRVKALAVEYVQSQSKDEE
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggactcatcctcaaagtctgtgctcagcagcagcgaggttgcgttccccagaggagga
ggatctgtgttgacgccgttggagatgaaaaccatctccaacaaggccacagaagatgtt
ttattcgaacaggcccaagccagcaaaagatctggcggctcgacgtcacatccagccaaa
aagcggaaaaagcaaagcaagacgcccgtgtccaagacggagacagaggaaaagggcatt
tctgtcgaccacatgacactcaaaaacttgatccccggatgcgaggtgttgggtcagatt
gtgagggtcgacaagatggacttggttttggccatcacagataacttggtgggccgtgtt
cctataaccgccatcggcgcagaggtttctgccatgcttgaaaaatacgaggctgccatg
gactcttctgacgaggaagacgacgagccaacacaaagctttgccccagaattccccaaa
ttggcatcgcttttcgagccgggacagtggctccgtgccattgtgacgcctacgcccgag
ggacaaagaggccttcatctttctatcgctccctccaatgtcaatgcttcgatggaagcc
gatgactttacgccgggaaacattgttcaggcgtccgtgaagtccattgaggaccacggt
gtagttttggatctcggtgttggaaagctctccggatttttatccaagaaggaattgaag
aaagctgacattcccctcctgtccttcactgtgggtaaagtcattctcacatctgtcgcc
agtgctgctgccagaactgtgtccttgagaccagcagaaaaggaaaacgtctccaagaaa
actgtcgtcacaaccatcagctccatcgatgccgttcatccaggtacgctcgtcaatgcc
attattgccgagttgtccgacgatggtgttgcagcaagattgttcggtatggtcgatgca
tcctttacgcttccgcatgttgaagagtatgcgcttgagaagttgaagaactcttttggt
atcggctccacagtcagagcgagaattatcggtacgttattgcaaaatggaacaaagaag
ttcattttgtccagggctactgctcctcttgccttacagccggagttggattcttctgct
ttggaagccttccctgtcggtttcatttttgactcgggcattgaagtcgtgggtgcagac
tccgatttcatctacctttctacaggctcacatatggcccaggttcacaagtcgcaagtg
gatccagagttggatcctaacatgaactatcctgttggatcaaaacacaacgcaagagtt
ttgggctacaacagaatcgacaacttgttggttgtgacgctcaatccaaagttgatcgcc
tccaaatttgtctctgcagatgacgtcccagttggcgaatacattccttctgtggagatt
atcaagattttggacgaggccaagggcatgattgtcaagatttttggcgatttcgaggct
ttggttccggctaaccacatgtccgacatcaagttggtgtacccagaaagaaagttcaaa
gttgggggtaaggtgaagggcagagtcttgtacaagaacggaaagaaattatttgtcacg
ttacggaaaagtttagtcaatatggaagatgatgccattgtcagcgatatcgaaaacgtt
gttgtcggtttcaaaaccaccgctattgttgacagatttgttcctggtggtgctttggtc
actttctttggcaaattgagagcatacttgcctaaaagcgaaatttccgaaacttttgtt
gaggaagccaaagactacttgaaattgggccaagccgtcaccgtgagaattttgagtgtc
aatgcagaggaaaacaagatttcggtgactttgcgtcaatcgactgaactcagcaataag
caaattgagcatcttgagctgatttctatcggaagaacccttgttgaagctaacatagtg
gagaaaaccaaagaagctgtcattatcgaactagaaggctccaacttgcgcggtgttatt
agcacaaaccatctttctgatggaaactacgaagaaaacagaatcatttacaaaaaccta
gagattggcggtctgattgaagttcttgttcttgagaaagatattcgtgccagaactgtg
attgcatctgccaaaaagtcgttgattacagcagctagaactgaaacattgcccgtgcat
tatgaagacattcatgtcggttctatggttccaggttacatcaagtctgtcactaacttg
ggtcttttcgtttcttttggtggccgtttgacaggtttggtattggccaagaatgctaca
aacgatcctactgaggacttgtccagcaaattctacaagaaccaatccgttgtgtgtgat
gttataaaaacagacgatgacaacaagagatttttgttgtcgctcacaagcagtgatagt
gcaggtgcattcgaatcttccaaattatccaatcctgtggatgctcaaatgaagtcgaaa
accgactatgccgttggtgtttctacttttggtgtcatcgattcgatagaaccaggttac
ttgaaaatccgtttggcagacaatttggaaggaagagttgaagccaaccaatgcattcgt
tcgtggaaatccatcaaagacccaaagaatcctcttgcgtctttcactgtgggagaaaaa
gtcccagtgaaagtgttgggtacctacgactacaaatggcattcttttacgaccgccgct
gcattcaagaagacgacagtattgagtttgactaccgcaaaggatcagttgaagagcaaa
tccccttacaaaccagatcaattgtctgacattactgtgggttctgaatatgtcgtttac
atcgagagattccacaatggaacagctaaagtctccttaactcctagcatcaagggcgaa
atttccgtgtacaatctctcggacgatatgtcaaagtactccaaatttgacgagtccttc
cccttgggaactgcattgaaagccaacgtgattggtattgacttcgaacatggaatggtc
aagttgtctgcaagaaaacaaaacctcacctctttcactcagctcaaagttggtgatcaa
tacccagcaaaggttttcaaagtcacaaagtcgtttgttttggttgaactagctccaggt
cttgttggttactcgtacattacagatgccttggatgactacgatcttaagttggaagaa
acctatcacatcaatcagcccgtggctgtgaccatcactgaaactcttgaaaatgaggga
aaattcagtgtcagcttgagaaacgagaagacagccaaagacaaaccagtcaactccatc
agcgaactccatcgtggagacgttgtgaaaggattcatcaaggctataaataacgctggt
ctttatgtttctttgggaagagatttgttcgccttagttcctgtcagtaacatttcagat
gctttcttggttgactggaagaaattcttcaaaccattccaaagcattgttggtaagatt
gttcaatgtaaggttgaaggtcgtatcaccatgacgttgaaagaaagtgaacttaatggc
cacttggctgactacaaaactttcgatgaattggaaatcggcgagatttacgatggtacc
gttaaaaaagttgctgattatggtgtttttgtgaaattggacggcactgctgttgatgga
ttgtgccatcgttctgaaattgctgacaaccaagtcgaaaacgctgccgctttgtttgct
gaaggtgacagagttaaggtgaagatcctcaaaatcttcaaggacaagaagcaactttct
ttgggtatgaaagcttcttacttcacggaagctgatgagaactccgatgatgtggaaatg
gctgaagctctggatgacgatgacgaagaggaagtcaactctgaagacgaagttatggct
gaaggtttcagtgataatgaccagagttcagactctgaagatgaagaagaagagtccggt
aaagagggaacagatgctgctccaactggcttgagtggattgtctactaacggttttgat
tggacagcttctattttggaccaagccgaggacaatgaatcttcatcagatgaagatgaa
gacttcaccgaatcccacaagaagagaaagagaaagggaaagaagaacgtcgaagataag
acaagcgaaatcaacgctagagctccagagtccgtgcaagacttcgaacgtatgatcatc
ggtaaccccgactcctccattctttggatgaactacatgtctttccagttgcaattgggt
gagattgacaaatcaagagaaattgccgaaagagctttgaagactattaactaccgtgaa
gagcaggaaaagatgaatatttggattgctattctcaacttggaaaacagttttggctcg
gaagaatctttggatgcggctttcaagcgtgctgttcaacacatggattccttgaccatg
caccagaagttgattggaatttaccaattgtctgagaagttcgacaaggcagacgagttg
tacagagtgatgaccaagaagtttgctaagaacgttaatgtgtgggtcctgtttggctct
tctttgatggacaggaaattgtttgatgatgcacacgaacttttggctcgtgctttgcaa
tcgttgccaaaatccagccacattgatgtggtgagaaagtttgcacagctcgaatttgcc
aagggtgatcccgaacagggcagatctttgtttgaaggtttggttactgacgctccaaag
agaattgacttgtggaacgtctacattgatcaagaaatcaagcaaggtgacagagaaaag
attgttctgttgtttgagagagttgttacgaagaaactttcgagaaagcaagccaagttt
ttcttctccaagtggcttggatacgaagaagaacatggaagtgaacagtctgcttctcgt
gttaaggctcttgcggtggagtatgtccaatcacaatccaaggatgaggaatga
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