Clavispora lusitaniae CBS 6936: A9F13_18g00539
Help
Entry
A9F13_18g00539 CDS
T05147
Name
(GenBank) putative rRNA-processing protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_18g00539
04121 Ubiquitin system [BR:
clus04121
]
A9F13_18g00539
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
90S particles
Other 90S particles
A9F13_18g00539
Ubiquitin system [BR:
clus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
A9F13_18g00539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
eIF2A
Lbh
DUF2025
Motif
Other DBs
NCBI-ProteinID:
OVF06742
UniProt:
A0AA91PWC4
LinkDB
All DBs
AA seq
455 aa
AA seq
DB search
MKVKTISRSADTYVPARNTQESALPRNLDPALHPFERAREYTRAVTATKLERMFARPFVG
QLGDGHRDGVYCLARNFRTTNQVASGSGDGVVKYWNMTSRAETLSFRAHYGMVTGLFVSP
AGLLSCGDDKTIKLWSLDVNEFGETDDSKVKDAGLLKTFGGEHAFKGLDHHVSDELFVTG
GASVQLWNMSRSNYVANMSWGADNVNSVRFNRTETNVVASCGADNSIVLYDIRTSTPVQK
VVTDFRANALSWNPMEAFHFASGHEDHNAYLWDMRNLTKSLNIYKDHVSAVTDLDFSPTG
QELVTGSYDKTIRLYRAREGHSRDVYHTKRMQHVFCVGFTTDSRYVLSGSDDANVRVWRS
NASERSNVKSSRERAKLNYDQKLKDRYKYMPEVRRIARHRHLPSVVKKAQQIKTVELQSL
KRREENARKHSKPAPRVPERQKHVRGTAIKEDEEQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaaaaccatttctcgctcggccgacacctatgtccccgcccgaaacacgcaa
gaatccgccttgccccgcaacttggacccggcgctccacccgttcgagcgggcccgagaa
tacacgcgagcggtgacggccacaaagctcgaaagaatgtttgcccgtccgtttgtgggc
cagctcggcgacggacaccgtgatggtgtctactgtcttgcccgcaacttccgcacgaca
aaccaggtggcctcgggctcgggcgacggtgtggtcaagtactggaacatgacgtcgcga
gcagaaacgctcagcttcagagcacactacggcatggtgacgggccttttcgtgtcgccg
gcaggattgctctcatgcggagacgacaagaccatcaagttgtggtcgttggacgtgaac
gagtttggcgaaacggacgactccaaagtcaaggacgccggcttgctcaaaacgtttggc
ggcgagcacgccttcaaaggcttggaccaccatgtgtcggacgagcttttcgtcaccggc
ggcgcctcggtgcagctctggaacatgagccggtccaactacgtggccaacatgtcgtgg
ggcgccgataacgtcaacagcgtgcggttcaaccgcacggaaaccaacgtggtggcgtcg
tgtggcgccgacaactccattgtgttgtacgacatccgtacaagcacgcccgtgcagaag
gtggtgacggatttccgggccaatgcgctctcgtggaacccgatggaggcgttccacttt
gcgctgggccacgaggaccacaacgcctacttgtgggacatgcgcaacttgaccaagagt
ctcaacatctacaaggaccacgtcagtgccgtcacggaccttgacttcagtcccacgggc
caggagcttgtcacgggctcctacgacaagaccatccgcctctaccgggcccgcgaaggc
cactcgcgtgatgtctaccacaccaagcggatgcagcatgtgttttgcgtgggcttcacc
acagactcgcggtatgtgctcagtggctcggacgacgccaacgtgagggtgtggcggagc
aacgcatcggagcggtcgaacgtcaagtcgtctcgcgaacgggccaagctcaactacgac
cagaagttgaaggaccgctacaagtacatgcccgaggtgcgccgcattgccagacaccgc
cacttgcctagtgtggtgaagaaggcgcagcagatcaagacggtcgagctccagtcgttg
aagcggcgcgaggagaacgcaagaaagcacagcaagccggcgcctcgcgtgcccgagcgc
cagaaacacgttcgtggcacggccatcaaggaggacgaggagcagtga
DBGET
integrated database retrieval system
