Clavispora lusitaniae CBS 6936: A9F13_18g01034
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Entry
A9F13_18g01034 CDS
T05147
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
clus
Clavispora lusitaniae CBS 6936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
BRR2_plug
Helicase_PWI
AAA_22
PhoH
AAA_25
DEXQc_Suv3
AAA_16
AAA_34
Motif
Other DBs
NCBI-ProteinID:
OVF06787
UniProt:
A0AA91PWE4
LinkDB
All DBs
AA seq
2128 aa
AA seq
DB search
MSGHIEGGSLDSAAQGKSRKDENEIDYNPTSLAGQISVKEMGTRAKSEPEGQKSQPTTTE
QTNQSTNIDSFSADYALENMAYRPTTAQNSDIFEQLIVCVRKHIPDESHSVILSAADAIL
ELLKGDTSMTQQKAEIEKLLSLTLDEEQFTELSGYASQITDFGEREEEEESGDIVAVEFE
EDGAQDQFADAGMADDMIPDNLAAAEDTKAESVPEGEDMPHAIVVAPGQEKEGEKEDGGK
EAEGSALTLGDITPDFLFSRLSAAAPETDADEIRETCKKISRVLNDSEIAGEDLEQRLMA
ATDFRYLDFVHMCMEQRWRIVFGVKLKQNRAKALEQMRAMGLEELEREASGAKKRAAAEP
ARERKRPRTEEREDTEKTLEERDTKATKATKATNTTKDTLDDTASITDETATKTTEQNLR
IVDLGALAFDQGAHLMASAKISLPKGSYQQNKKQYDIISVPAPTPPPPAAEPLVSIAEMP
EWAQAAFPAGETATLNRIQSQIYPKAFLSDENLLLCAPTGAGKTNVAMLALLRVLGNNRD
ASGRVMVKKFKCVYIAPLKALVAEQTREFSRRLTSFGVVVKELTGDSALSAREIREAQVL
VTTPEKWDVVTRKEPHFARLVQLVVLDEIHLLHDERGPVLESIVVRAKRAAHARLVGLSA
TLPNYEDVASFLGVRAAGLFYFDASFRPCPLQQEYIGIKEKKAIRKVAAMNDACFEKVAS
SVAQGHQVIVFVHSRKDTVRTAQFLAARAEAEGVRTVRSDGAREILAQEAAAAKNKNLAE
ILPSGFAVHHAGLARPDRSAVEDLFAQGHVQVLVSTATLAWGVNLPAHTVIIKGTDTYSP
EKGSWVQLSPQDILQMLGRAGRPRYDKSGEGVIITAHDELQYYLAVLNQQLPIESQLMAR
LADCINAEVASGAVDCRAQACDWLAQTYLYIRMLRSPRLYQVGAEYAGDTALEQKRADLA
HSALVLLAQHRLVDYDPQTGKTAATELGRIAANFYISYTTAAAYHSALRPWMSEIDLLGV
FARADEFRFVPVRAEEKVEVARLADQVPIPLKEAPDRPRAKIGVLLQAHVSRLRLDGFAL
LADMVYVTQSGGRLLRALFEMCRSRRWAQLAHAALSLCKSVESRMWQAASPFRQFGDLAP
DQVVRAAEASHLPFSSYFDLSPAELAEAINFRGHSAQAHQLLAQYPRFELEARAHPVSAD
LVRVSVRLAPNWTWNAKVHARTERFWLTVEDGDGERILHDEEVRVSQDTVGRDLFVDCVV
AVSEPLAPALFVCVASESWLHSQWRAPVALFDTRMPKAPSAPTKLADATVPTAALDLEGQ
GLGIPHLNRMQTQCLHSVFRTNENVFVGAPKGTGKTVLAQLALLACWRQNKQRAVYIQPT
QALVDARAREWAALFAPLTDPPKNVARLTGDAAADARILALNHLVLATPEQFDAVSRRWR
SRRALQDLGVVIADDVHLLGARPAYEVVLARLRLMAGQGVNVRVVALGSPVLYGREMASW
LGCAKEHTYNFVDAPDGAREVRLEPLGARADASACAKFVAASSQCVAFVPTHAAAAELVA
AIAEAEENGKHGENGKNGENGKHGKNSKDQASPDLPADLIADGAARRTLGRGVGLLHENL
VPADRAHIVRLFSKGQVRVLVATRPAAAYAPPSRDVAVFGTSAPELTHSGAYFLSDVAEM
VGCARGGRALIFAPAPQLAYYARFVAAPLPVESALDSSLAAPFAYEVAVRTFRSKQDAVD
WLTYTWLYRRLAQNPSFYGLKDVSHLGVSEFLSELVESTLESLAEGGLIEVNEDDEDDED
RSDDEDDEELSPLNGAMIASHYNVSPQAVAAFAGLSAKDRLRGIFSAVVSAPEFESLPVR
ADELPILTRLSSAVPLKLAPESDLGSPHTKAFLLLQAYLSRISVSGDLASDQRTVLEKSL
PLVFACTDTLSSEGHLNALQAMDLAQMLVQGMWNSESPLRQLPHVTQETLARAKKYNVES
VYDIMALEDEERDDVLQLPEEKLNDVACFVNKYPNIDISYEMDVAEPLTAGEQKQITITV
ERDEEMEDLLVESATFPFPKQEGWWLVVGDATSRQLYAIKKISVAHETQSVTMSFSVPTP
GKHKLTVWCMCDSYIDADKEMEVEVEVV
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacacattgaaggcgggtcattggattcagcggcacagggaaaaagccgaaaa
gacgaaaatgagatcgattataacccaacgtccttagctggacagatttctgtcaaggaa
atgggcacccgagcgaaatcggagcctgagggccaaaaaagccaacccacaacaacagaa
caaacaaaccaaagtacaaatatcgacagcttttcagcagactatgcgctcgaaaacatg
gcgtaccgacccacaacagcgcagaacagcgacatattcgaacagcttatcgtttgtgtc
agaaaacatattccagatgagctgcacagcgtaattctttcggcggcagatgcaatctta
gagttgctcaaaggcgacacaagtatgacgcagcaaaaggctgagatcgaaaagcttcta
tcgttgaccttagatgaggaacagttcacggaactatcagggtacgccagtcagattact
gattttggagaacgagaagaggaggaagagagcggcgatatcgttgcggtggagtttgaa
gaggatggggcccaggaccaatttgctgacgctggtatggcagacgacatgatacccgac
aatttggcagcggcagaagatacaaaagcagaaagcgtgcccgaaggcgaagacatgcca
cacgccattgttgttgcgccaggtcaagagaaggagggagagaaagaagatgggggaaaa
gaagctgaaggttctgcgctcactttgggcgacattacgcccgattttcttttctcgcgc
ctcagtgcggcggcgcccgaaaccgacgcggacgagatccgtgaaacgtgcaagaaaatc
tcgcgggtgctcaatgacagcgaaattgcgggcgaagatttggagcagcggctcatggcg
gcgaccgatttccgatacctcgactttgtacacatgtgcatggagcaacgatggcgcatt
gtttttggagtgaagttgaagcagaaccgggccaaggcgctcgaacagatgcgggcgatg
gggctcgaggagttggagcgcgaagccagcggggcgaaaaaacgggcggccgctgagccg
gcgcgcgagcgaaaaaggccgcggacagaagagagagaggatacagagaagactctagaa
gaaagggacacaaaagccacaaaagccacaaaagcgaccaacaccaccaaagataccttg
gacgacacagcctcaatcacagacgaaaccgccaccaaaaccacggagcagaatctccgc
atagtggatctcggcgcgctcgcgttcgaccagggcgcccatcttatggcgagcgcgaaa
atctcgctccccaaaggctcgtaccagcagaacaaaaagcagtacgacatcatcagcgtg
ccggcgcccacaccgccgccgccagccgccgagccgcttgtgtcgatcgcagagatgccc
gagtgggcacaagcagccttccctgcgggcgaaaccgccacgttgaaccgcatccagtcg
cagatataccccaaggcgtttttgtcggacgaaaaccttcttctctgcgcgcccacgggc
gcgggaaaaaccaacgtggccatgttggcgcttcttcgcgtgttgggcaacaaccgcgac
gccagcgggcgcgtgatggtgaaaaaattcaagtgtgtctacattgcgccgctcaaggcg
ttggtggcagaacagacgcgcgagtttctgcggcgcctcacgctgtttggcgtggtggtg
aaggagcttacgggcgacctggcgttgagcgcgcgcgagatccgcgaggcgcaggttttg
gtgaccacgcccgaaaaatgggacgtggtgacacgcaaggagccgcactttgcgcgcttg
gtgcagttggtggtgctcgacgagatccatcttttgcacgacgagcgcgggccggtgctc
gagagcattgttgtgcgggcgaaaagagcggcgcacgcgcgcctcgtcggtctttcggcc
accttgcccaactatgaggacgtggcgctgtttttgggcgtgcgcgcggcggggcttttc
tacttcgacgccagtttcaggccgtgcccattgcagcaggagtacattggcatcaaggaa
aagaaggcgatccgcaaagttgcggccatgaacgacgcgtgtttcgagaaggtggcctcg
agcgtcgcccagggccaccaggtgattgtgtttgtgcatctgcgtaaagacaccgtgcgc
acggcgcagtttcttgcggcgcgagcggaggccgaaggcgtccgaacagtgcggtcggac
ggcgcgcgcgagatcttggcgcaagaggcggcggccgcgaaaaacaaaaacttggcagag
atcttgccctcgggcttcgccgtgcaccacgccggtcttgcgcggcccgaccggtctgct
gtcgaagacctctttgcccagggccatgtgcaagtgttggtgtccacggccacgttggcg
tggggtgtcaatttgccggcgcacacggtcatcatcaagggcacagacacgtactcgccg
gaaaagggcagctgggtgcagttgctgccgcaggacatattgcagatgcttgggcgtgcc
gggcggccgcgctacgacaagtcgggcgaaggtgtgatcatcaccgcgcacgacgagctc
cagtactatttggcggtgctcaaccagcagcttccgatcgagtcgcagctcatggcacgg
ctcgccgactgcatcaacgccgaggtggcgctgggcgcagtggactgccgcgcccaggcc
tgcgactggttggcccagacgtacttgtacatccgcatgttgcggtcgccgcgcctctac
caggtgggcgcggagtacgcgggcgacacggcgctcgagcagaagcgcgcggaccttgcg
cactcggcgctagttttgctcgcgcaacatcgcttggtcgactacgacccgcagacgggg
aaaaccgccgcgaccgaattgggccgcatcgccgccaacttctacatttcctacaccacc
gctgccgcctaccactcggcgctccggccgtggatgtctgaaatcgaccttcttggcgtt
ttcgcccgcgccgacgagttccgctttgtgcctgtccgcgccgaggagaaggtggaggtg
gcgcggttggcggaccaggtgccgattcccttgaaagaggcgcccgaccggccgcgcgcc
aagatcggcgtgcttcttcaggcgcacgtttcgcgcttgcgcttggacggctttgccttg
ctcgcagacatggtgtacgtgacgcagtcgggcgggcggcttttgcgggcgctttttgaa
atgtgccgctcgcggcgctgggcgcagcttgcccacgcggcgctttccttgtgcaagctg
gtggagctgcggatgtggcaggccgcatcgcctttccggcagtttggcgacttggccccc
gaccaagttgtgcgtgctgcggaggcgtcgcatcttcccttctccagctactttgacttg
tcgccggccgaacttgccgaggccatcaacttccgcggccacagcgcgcaggcgcaccag
cttcttgcgcagtacccgcgctttgagttggaggcgcgcgcgcaccctgtgtcggccgac
ctcgtgcgggtgctggtgcgcctcgcgccaaactggacctggaatgccaaagtgcacgcg
cgcaccgaacggttttggttgactgtggaagacggcgatggcgagcgcattttgcacgac
gaggaagtgcgggtctcgcaggacaccgtgggccgcgatcttttcgtcgactgcgtggtg
gcagtgtcggagccgcttgcgccggcgcttttcgtgtgcgtggccagcgagtcgtggctc
cactcgcagtggcgcgcgcccgtggcgcttttcgacacgcgcatgcccaaggcgccgctg
gcgcccaccaagttggctgatgccacggtgccgacggcggcgctcgacttggaaggccaa
ggtctcggtatcccgcacctcaaccgcatgcaaacacagtgcctccattcggtgttccgc
accaacgaaaacgtgtttgtaggcgcgcccaagggcacgggcaagacggtgttggcgcag
ttggcgcttcttgcgtgctggcgccagaacaaacagcgcgccgtgtacatccagccgaca
caggcgctcgtggacgcgcgcgcgcgcgagtgggcggcgcttttcgcgcctctaaccgat
ccgcccaaaaatgtggcccggctcacgggcgacgccgctgccgacgcgcgcatcttggcg
ctcaaccacttggtgcttgcaacgcccgagcagtttgacgccgtgtcgcgccgctggcgt
ctgcgccgcgcgctccaggacttgggcgtggtcattgcagacgatgtgcacttgttgggc
gcgcgcccggcgtacgaggttgtgcttgcgcggcttcgcctcatggcgggccagggcgtc
aacgtgcgcgtggtggcgctcggtctgccggtgttgtatgggcgcgaaatggcgctgtgg
ctcgggtgtgcgaaggagcacacgtacaactttgtggatgcgcccgacggcgcgcgcgaa
gtgcgcctcgagcctttgggcgcgcgcgccgacgcctctgcgtgcgccaagtttgtcgct
gcaagttcgcagtgcgtggcgtttgtcccaacgcatgcggctgcggccgaactagtggcg
gctatagccgaggcagaagagaatggcaagcatggcgagaatggcaagaatggcgagaat
ggcaagcatggcaaaaactccaaagaccaggctctgcccgatctccctgccgatcttatt
gccgacggcgcggcgcggcgcacgctcggtcgcggcgtgggcttgctccatgaaaaccta
gtgccggcagacagagcgcacattgttcggctcttttcaaagggacaggtgcgtgttttg
gtggccacacggccagcggcagcgtacgcgccgccttcgcgcgacgtggctgtctttgga
actctggccccggagctcactcatctgggcgcttactttcttagcgacgtggcggaaatg
gtgggctgtgctcgcggcggccgcgctctcatattcgcgcccgcgccgcagctcgcttac
tacgcgcggttcgtggccgcgcctctcccggtcgaaagtgcgctcgacagttcgctcgcc
gcgccattcgcgtacgaagtcgctgtgcgcaccttccgctcgaaacaagacgctgtcgac
tggctcacttacacgtggttgtaccggcggttggcgcagaatccaagcttctacggcctc
aaagacgtgtcgcaccttggcgtgtcggaatttctttccgagcttgtcgagtcgacgttg
gagtcgttggctgagggcggcttgatcgaggtcaacgaagacgacgaagacgacgaggac
agaagcgacgatgaggacgacgaggagctttctccattgaacggagccatgatcgcctcg
cattacaacgtttcgccgcaagccgttgcggcctttgctggcttgtcggccaaagaccgc
ttgcggggcattttttcggccgtggtttccgccccggaattcgagtccttgcctgttcgt
gcagacgagttgccaattctcacgcggctttcgtctgctgttccgctcaaactcgcgcca
gaatcagatcttggtctgccccacacaaaagcatttttactcttgcaagcgtacttatcc
cggatttctgtttcgggtgacttggccagcgaccagcgcacagtgcttgagaagtcgttg
cctcttgtcttcgcatgcacagatacactttcgtccgagggccatttgaacgctttgcag
gcaatggatcttgcacaaatgctcgtgcaaggaatgtggaacagtgaaagcccgcttcgg
cagttgccccacgtcacacaggagactttagctcgggcgaaaaagtacaatgtcgaatct
gtgtatgacatcatggctttggaggatgaagaaagagacgatgttttgcaattgccagag
gagaagctcaatgatgttgcctgtttcgtcaacaagtaccctaacattgacattctgtat
gaaatggatgtcgctgaacctctcacggcaggcgaacagaagcagattactattaccgtg
gaaagagatgaggaaatggaagatttgctcgtggagtcggccacgtttccttttccaaag
caagaaggttggtggcttgtggttggcgatgcaactctgcgccaattgtatgcaatcaag
aagatttctgtggctcacgaaacccagctggtgacgatgctgttttctgttcctactcct
ggaaaacacaaattaaccgtgtggtgtatgtgcgattcgtacatcgacgcagacaaggag
atggaggtggaagtggaggtggtttaa
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