Clavispora lusitaniae CBS 6936: A9F13_18g01133
Help
Entry
A9F13_18g01133 CDS
T05147
Name
(GenBank) putative DNA-directed RNA polymerase III subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9F13_18g01133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_18g01133
Enzymes [BR:
clus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9F13_18g01133
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
A9F13_18g01133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
OVF06791
UniProt:
A0AA91PWT0
LinkDB
All DBs
AA seq
1458 aa
AA seq
DB search
MKEVVVDVAPKCIKGLEFSALSARDIVAQSEVEITTRDLYDLEKGRSVREGGALDTKMGT
STNAVECSTCHGNLATCHGHFGHVRLALPVFHVGYFKAIISVLQCICKNCAAVLLDEQTK
RAFLSDLRRPNIDNLRRMKVLKKVVEQCKKQRRCLKCHHVNGVVKKAASGAGPAALKILH
DTFRYVGKKSAPEKDLWDREFDEVFHRNPELEKFAKRVHEDLNPLKVLNLFRQITPQDCE
LFGIDAARGGRPEMYIWRYLPAPPVCIRPSVMMDNQSNEDDLTVKLTEIVWTSSLIKAGI
EKGISINNMMEQWDYLQLSVAMYINSDSANPALLPGGMGGSGSKSSKPIRGFCQRLKGKQ
GRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPDRVAKILTYPEKCTRYNRQKLQKLIL
NGPTVHPGANYVLKQNEVAKRNLKFGDRVKLAKTLRIGDIVERHIEDGDVVLFNRQPSLH
RLSILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNL
LTPKSGEPIIAATQDFITGSYLISHKDSFFDRASLVQLLCMMSDADMQFDIPPPTVFKPV
MLWTGKQVFSMLIRPNKKSNVVINVDAKNKTFIPPPKHLPNEMSPNDGFVVIRGSQILSG
VMDKSTLGDGKKHSVFYTILRDYGPDEAAKAMNRMAKLCARYLGNRGFSIGINDVTPGAD
LKAKKERMVEAAYAKCDELIDLYTKGKLETQPGCNEEQTLEAKIGGLLSKVREEVGEVCI
RELDSLNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFTKMSKTP
QSKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSSYDN
TVRNSSNGIVQFTYGGDGLDPLDMEGDAQPVNFNRQWDHAYNITYNQKEANLLPFQIMDV
VNSILAPLENKLVRYDNLGNLIEGEIGDRIEYIDQKDAERAFYQSIRTYVQKKATQLARL
RQQKKLRPFLTKLEDDGDMVLDEDPVSINAINQLMKISQTCVEEFLKQCLYKYLRARVEP
GTAVGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIINTVL
VNDEDEVAARVVKGRIEKTLLRDVAFFVEDVYKNDMAYLSIKIDLKTIEKLQLELTMDNI
RQAIANAPKLKILNSEVSVYGKDRINVLVTLRESKSESLARTAASDYKASDVNNSLFFRM
QHLKRALPDVVIKGLPNISRAVINIRDDSKKELLVEGYGLKDVMSTDGIVGTKTSTNHVL
EVYEVLGIEAARASIIGEIDYTMSKHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMR
DSVLQLASFEKTTDHLFDAAFFMKNDKIEGVSECIILGQTMSIGTGAFKLVKTSHFEEKH
LKPKPCLFEGLCEVSAMA
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtggttgtcgacgtggcgcccaaatgcattaaagggctcgagttttctgcg
ttgtcggcgcgcgacattgtcgcccagtccgaagtcgaaatcaccacgcgagacttgtac
gatttggaaaagggcagaagcgtgcgagaaggcggcgccttggacacaaaaatgggtacc
tccaccaacgctgtcgagtgtagtacatgccacggaaacttggccacgtgccacggccac
tttggccatgtgagattggccttgcctgttttccacgtgggctacttcaaggccatcatc
ctggtgcttcagtgcatctgcaagaactgtgcggcggtgcttttggacgagcagacaaag
cgggcgtttttgctggacttgcgccggcccaacatcgacaacttgcgccgcatgaaggtg
ctcaagaaggtcgtggagcagtgcaaaaagcaaagacgctgcttgaagtgccaccacgtc
aacggtgtggtgaaaaaggccgcttccggtgccggccctgctgccttgaaaatcttgcac
gacaccttccggtacgtgggcaaaaagtctgcgccggagaaagacttgtgggaccgcgag
ttcgacgaggtgttccaccgcaacccagagctcgaaaaattcgccaaacgtgtgcacgag
gacttgaatccgcttaaagtgctcaacttgtttcgccagatcacaccgcaggactgcgag
ctttttggcattgacgccgcccgcggaggaagaccggaaatgtacatctggagatacttg
cctgcgccgccagtgtgtatccgtccttcggtgatgatggacaatcagtcgaacgaggat
gatctcactgtgaaattgaccgagatcgtgtggacgtcgtcacttatcaaggccggtatc
gaaaaaggtatttccatcaacaacatgatggaacagtgggactacttgcagttgtctgtg
gccatgtacatcaactccgactcggccaacccggcgttgcttcccggtggaatgggagga
tcgggctcgaaaagcagtaagccgatccgtggtttttgccagagattgaaaggtaaacag
ggtcgtttccgtggtaacttgtctggtaaaagagtggatttttcggggcgtacagttatt
tctcccgatccaaacttgcgtattgatgaagtggccgtgccagaccgtgtggcgaaaatc
ttgacctatcctgaaaagtgtacacgctacaatagacagaagcttcaaaaattgatcttg
aacggacccactgtgcatccaggtgctaactacgtcttgaaacagaacgaagtggcaaaa
agaaacttgaagttcggtgatagagtcaagcttgcaaaaactttgcgcattggcgatatc
gtcgaaagacacatcgaagatggcgatgttgttcttttcaacagacagccatcgttgcat
cggttgtccatcttgtcgcattacgctaaaatccgtccatggcgtacattccgtcttaac
gaatgtgtgtgtacaccttataatgccgatttcgacggagatgaaatgaacttgcatgtt
cctcaaacagaagaagcccgtgctgaggcaatcaacttgatgggtgtgaagaacaatttg
cttacgccgaaatcaggtgagcccatcattgctgccacgcaagatttcattactggctca
tacttaatttctcataaagactcgtttttcgaccgggcttcgttggtgcagcttttgtgt
atgatgtcggatgcagacatgcagtttgacattcctccacctactgtcttcaagccagtc
atgttgtggaccggaaaacaggtgttttccatgctcatccgtccaaacaagaagtccaat
gttgtgatcaacgtggatgcgaaaaacaaaacgtttattccacctccaaagcacttaccc
aatgaaatgtcgccaaatgacgggtttgtggtgatccgtggatctcagatcttgtcggga
gtcatggataaatctacgttgggtgacggcaaaaaacactctgtgttctacactatattg
cgagattacggaccagatgaggctgcgaaggccatgaatagaatggctaaactctgtgcc
agatacttaggaaaccgtggtttctccattggtatcaatgatgtgactccaggtgcagac
ttgaaggcaaagaaggagagaatggtagaggctgcgtatgccaagtgtgacgagttgatt
gacttgtacactaagggaaaattggaaacgcaaccgggttgtaatgaagaacaaactttg
gaggcgaaaatcggtggtttgctttcgaaagtcagagaagaggtgggtgaagtttgtatt
cgagagttggattcgcttaatgcgccgttgatcatggctacatgtggttctaaaggttcc
actttgaacgtttctcaaatggtggctgtcgtgggtcaacagattatctcgggtaaccgt
gtgcctgatggatttcaggatagatcattaccgcatttcaccaaaatgtccaaaacgccg
cagtccaagggttttgttagaaactcttttttcagtggtttgtctccgccagaattcttg
ttccacgctatttccggaagagaaggtttggttgataccgctgtcaagactgccgagact
ggttacatgtcgcgtcgtcttatgaagtcccttgaagatttgtcttcgctgtacgacaac
accgtcagaaactcttccaacggtatcgtgcagttcacttatggaggtgatggtttggat
cctttggatatggaaggtgacgcccagccagtgaacttcaaccgtcaatgggatcatgca
tacaacatcacatacaatcaaaaagaggccaacttacttccattccagatcatggatgtg
gtcaattcaattttggctcctttggaaaacaaattagtgcggtacgataacttgggcaat
ctcattgaaggtgagattggcgaccgcattgagtacattgaccaaaaggatgccgagcgg
gcattttatcagtcgatccgaacttatgttcagaaaaaggccactcaacttgcccggctc
cggcagcaaaagaagttgagacctttcctcaccaaactcgaagacgacggtgatatggtg
ctagacgaagaccccgttagcatcaatgcaatcaaccaattgatgaagatttcacaaaca
tgcgtggaggaattcttgaagcagtgtctttacaagtatctacgtgcacgtgtggagcct
ggaactgcagttggagctattggtgctcattctatcggtgagccaggtacccagatgacg
ttgaagactttccactttgctggtgtggcttcgatgaacgttacattgggtgttccgcgt
attaaggaaattatcaatgcggccaaggtgatttcgacgccgatcatcaacacagtgttg
gtgaatgacgaagacgaagttgctgctcgtgtggtgaagggtagaatagagaagactctt
ttacgagacgttgcatttttcgtggaggatgtttacaagaacgacatggcatacttgtcg
atcaagatcgacttgaaaacaatcgaaaagttgcagttagagttgactatggataatatc
cgtcaagccatcgccaacgcaccaaagttgaagatcttgaactccgaagtgtcggtttat
ggtaaggaccgcataaatgttcttgtcacgttgcgtgaatccaaatccgaatctttggcc
cgtacagcagcatcggactacaaagcttctgatgtgaacaacagcttgttcttccgcatg
cagcatttgaaacgagctttgccagacgtggtcattaaaggacttccgaatatttctcgt
gccgtgattaatatcagagacgatagcaaaaaggagttgttagttgaaggctacggatta
aaggatgtcatgagtaccgacggtattgtcggaaccaaaacaagcacaaaccacgtgcta
gaagtgtatgaagttttgggtattgaggcggctcgtgcatccatcattggcgaaatcgac
tacacaatgagtaagcacggtatgagtgtggatcctcgtcacattcagttgttgggtgac
gtgatgacatacaagggagaagttttaggtatcacgagattcggtttgagcaaaatgaga
gactcggtgttgcagttggcatcgttcgagaaaaccaccgaccatttgtttgacgcagcg
tttttcatgaaaaacgacaagatcgaaggtgtgtcggagtgtattattttgggccagact
atgagcataggaaccggtgcattcaaattggtgaagacatcgcacttcgaagaaaagcat
ttgaaaccaaaaccttgcttgttcgaaggtctctgcgaagtctctgcgatggcataa
DBGET
integrated database retrieval system
