Clavispora lusitaniae CBS 6936: A9F13_20g01012
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Entry
A9F13_20g01012 CDS
T05147
Name
(GenBank) putative general negative regulator of transcription subunit
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9F13_20g01012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_20g01012
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
A9F13_20g01012
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
A9F13_20g01012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-ProteinID:
OVF06600
UniProt:
A0AA91PWJ5
LinkDB
All DBs
AA seq
524 aa
AA seq
DB search
MSTRKLQQEFDKLQKKVAEGLQQFDDIHDKIASTENTNQKDKLEGDLRKEIKKLQRSRDQ
VKQWSGDSSNKLDRNVLQDIRSRIENAMERFKEMEKVSKMKQFSNEGLELQAKLGARGLD
EAKKLEATRYITDVLEELKRQNELLSADLAQYSHKKKSGGIQQAIDDLTEKIERNNFHVG
RLELVLRNLDNDQLEPERIDEIRDDLDYYVENNQAADFVEFNEFYDVLELDESLELSQSF
TVDDSPRKETPSPSEPKEKTVKVSDKEATKVKETKAEPKEPKVELKQPKPEATRVEVKEA
RSESRSGAVNEAKESKPEAKETKVEAREVRDTPTRAPPPGLAASPRKKAVASASPSPVLN
NENKTFWDTAGRPAQLAQHRLHSPLPFSAISSQLETSLLNCPDSFDSERPRHYNPTNVHP
SSVDYPQEPMYELHSAGVMRKFDTDTLFFCFYYSEGQDNLAKWNAARELSRRGWVFHRET
KQWFSQEQGKARKDEGYKYFDYQSSWLIRRKDQVEFGADARQTF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcgcaaactacagcaggagttcgacaagctccagaaaaaagtcgcggaaggc
ttacagcagtttgatgacattcatgacaaaattgccctgaccgaaaacaccaatcagaag
gacaaattggaaggagacttgcgcaaggaaatcaaaaagttacaacggtctcgtgaccag
gtcaagcagtggctgggtgatagcagcaacaagctcgaccgtaatgtgcttcaggacatc
cggagccgcattgaaaatgcaatggagcgcttcaaagagatggagaaagtttcgaaaatg
aagcagttttccaatgaagggttagagttgcaggccaaacttggggcacgtggcttagat
gaagcaaagaagctagaggcaacgcggtatattacagatgtacttgaagagctcaagcga
caaaacgagttgttgtcggcggatttggctcagtatagccataaaaagaaactgggcggc
atccaacaagcgatcgacgatttgaccgagaaaatcgagcgcaacaacttccatgtgggg
cgcttagagcttgttcttcgtaacttggacaacgaccagttagagcctgaaagaatcgat
gagattcgtgacgatttagattactatgtggagaataatcaggcggcagattttgtggag
tttaatgagttttacgatgttttggagctagatgagagcttggagttgagccagtctttt
actgtcgatgacagtccgcgcaaggagacgccactgcccagtgagccaaaggagaagaca
gtgaaagtgtcagacaaagaggccaccaaggtcaaggaaaccaaggcagaacctaaggag
ccaaaagttgaactcaaacagccaaagcccgaagcaacccgcgttgaagtaaaggaggcc
agaagtgagtcaagaagtggggcagtaaacgaggccaaagaatcaaaacccgaagccaag
gaaaccaaagttgaagcaagagaggtccgtgacacccctacacgcgcacctccacctgga
cttgcggccagcccacgtaagaaggcggttgctctggcttcgccgctgcctgtgctcaac
aatgaaaacaagacgttttgggacacagccggccgtccggcacagctcgcccagcatcgc
ttgcatagcccattgccattttcggccatcagtctgcagttggagacttcacttctcaat
tgtcccgattcgtttgatctggaacgacctcgccactacaacccaacgaacgtccaccca
tcgtctgtggactaccctcaagagcctatgtacgaattacacagcgcaggagtgatgcgc
aagtttgacacggacacattgttcttttgtttctactacagtgagggtcaggataacttg
gccaagtggaacgcagcacgcgagttgagccggcgtgggtgggttttccatcgcgaaacc
aaacagtggttttcgcaagagcaagggaaagcgcgcaaagacgagggctacaagtacttt
gattaccagagtagttggttgattcggcgaaaagaccaggtggagtttggtgcggacgcg
cgccaaacgttttaa
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