KEGG   Clavispora lusitaniae CBS 6936: A9F13_21g00121
Entry
A9F13_21g00121    CDS       T05147                                 
Name
(GenBank) putative mRNA-binding U2 snRNP complex subunit
  KO
K12828  splicing factor 3B subunit 1
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    A9F13_21g00121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clus03041]
    A9F13_21g00121
   03036 Chromosome and associated proteins [BR:clus03036]
    A9F13_21g00121
Spliceosome [BR:clus03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    A9F13_21g00121
 Complex B
    A9F13_21g00121
 Complex C
   U2 SnRNP specific factors
    A9F13_21g00121
Chromosome and associated proteins [BR:clus03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    A9F13_21g00121
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_2 HEAT Htt_N-HEAT_1 XMAP215_CLASP_TOG UTP20 MMS19_C TTI1 DUF5742 Arm GNC1_N UTP20_N
Other DBs
NCBI-ProteinID: OVF06194
UniProt: A0AA91PVM6
LinkDB
AA seq 968 aa
MKKLATYTAPAHLLEVERTVEVAQQPSYNDQRFGLSVDMESRTYRERMEPRKRLKSEPEN
ENEKKSTGKTIPLTDDVLDRIIPKGYIKATPPDAQQVDAYEMPISAPVAAETLPEYDGIA
MRKEDVRHFAVLLEAPREGPEARTQVRAAELVLRAKNGAPPVRRKAVRALRAQARELGPQ
PILSLVLPLMLEPALDEGDRHVLGKIVTRSLPAWDAEARPFVHQIVTAVGPQLLDPDMTL
RLEARDCIAALARSAGFASLVASLRPDLDHSDEYVRNVTARVFAVVAVTLGLAKVVPFVR
AVIKSKSAPARHTGIRIVHHICVLLGGGNGAAVLPHLASLVSVLQPALGDEAVHVRSAAA
GTMAQLAESVRPYGAAALEPVMPVAWAALRQHRGRALASFMRCVAAVVPALAHDSAYEEH
AAYYTRELVRVAAREFAAPDDDMRRSVLRVVASLPLSRAAVPQYRTALVAPFFRHMATRR
AASDSQTARLVSTVAVHLAQLDVPYVVEQLCPLAKDANESLRRVAADALGKIVSVGNTTD
NVSPTAALDDRAAAALLDAVLVAFQEQAPPHPVYLAAVAAVCRALGTRLTPHVPGLLSTV
LYRMKHADAEVRAQAADLAAAVAPAIGADAARRLIVFFYESLGEVYPEVLGSVVGALRAC
LAALDPNARMALENPPLAALLPALTPILKNRHDKVQEQSILFVGLIARTGADTINAKEWM
RVCYDLLDMLKSTRRRVRVAANATFGHIANTIGPQDVLAMLLDNLRVQERQLRVCTGVAI
AIVADTCAPFTVLPALMNEYRVPDKNVQNSVLKALSFMFEYLDGATARPYVYAVAPLLMD
ALTDRDQVHRQTGATVVRHLALACAARGVHADLHPVFVHFLNLVLPNIYEVSPHVISRVV
EALDALRIAVGAGVYLNYVWAGLFHAARKVRTPYWKLYNAAYVQHCDSLVPCYPRLEYDQ
LDELDVWI
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgaagaaacttgccacatacacagcacctgctcatcttttggaggtggagcgaacggtg
gaagtggcccagcagccatcctacaacgaccaacggtttggactctctgtcgacatggaa
ctgcgaacgtaccgcgagcgcatggagccacggaaaaggctcaaaagtgagccggagaac
gagaatgaaaagaaaagcacgggcaagacaatcccactcacagacgacgtgctcgatcgc
attattcccaaaggctacatcaaggcgacgccgccggacgcccagcaagtggatgcctac
gaaatgccaatttctgcgcctgtcgcagcagaaacgcttcccgagtacgatggaatcgcc
atgcgcaaagaagatgtgcggcactttgctgtgcttttggaggcgcctcgcgaaggcccc
gaagcacgcacacaagttcgggcggccgagcttgtgttgcgcgcgaaaaacggcgccccg
cccgtgcgccgcaaagcagttcgtgcgctccgcgcgcaggcgcgcgaacttggcccgcag
cctatattgctgcttgttctcccgctcatgcttgagcctgcgctcgatgaaggcgaccgc
catgtgctcgggaagattgtcacgcgcagtctcccagcatgggatgcagaggcacggccc
tttgtgcaccagatagtcaccgctgtcggcccgcagcttcttgatccagacatgacgctc
cggctcgaggcgcgagactgtatcgctgcgcttgcgcggtcggcaggatttgcatcgctt
gtggcgagcttgcgcccggacctcgatcacagcgacgagtatgtgcggaacgtgactgcg
cgcgtctttgccgtggtggccgtgacgttgggtctcgccaaagtggtgccgtttgtgcgc
gcggtgatcaagctgaaaagcgccccggcccgacacacgggtattcgcatagtccaccac
atttgtgttctacttggaggtggcaatggcgcggcagtgttgccgcacctagcgtcgctt
gtatctgttttgcagccagccttgggcgacgaagcagtgcatgtgcggctggcagcagcg
ggcaccatggcgcaacttgccgagagcgtgcggccatatggtgctgcggcgctcgagccg
gtgatgccagttgcatgggcggcacttcgacagcatcgcgggcgtgcgcttgcgctgttc
atgcggtgtgtggccgcagttgttccggctttggcccacgactctgcctacgaagaacat
gctgcctactatacgcgcgagcttgtgcgcgtggcggcgcgcgagtttgccgcgcctgac
gacgatatgcgccgctcggtgttgcgggtggtggccagcttgcccttgtctcgcgctgcc
gtgccgcagtaccgaacggctctcgtggcgccctttttccgccacatggccacgcggcgc
gcggcgctggactctcagaccgcgcggctcgtgagcactgtcgccgtacacttggcgcag
ttggatgtgccgtatgtggtggaacagctttgcccgctcgcaaaggacgccaatgaaagc
ttgcggcgtgttgctgcggatgcgctcggcaaaatcgtcagcgtcgggaatacgaccgac
aatgtttcccctacggcggcgctcgacgaccgtgcggctgcggcccttttagacgccgtt
ctcgtggcgtttcaagaacaagcgccgccgcacccagtgtacttggcggcagtggcggcc
gtatgccgcgcccttggcacacggcttacaccgcacgtgcctggtcttctcagcactgtc
ctttaccgaatgaaacatgcagatgccgaggtgcgggcacaggctgcggatttggcggct
gccgtagcacctgccattggtgccgacgccgcgcggcgcctcattgtgttcttctacgaa
ctgttgggtgaagtgtaccctgaagtgctagggtcggtggttggcgcattgcgcgcgtgt
ttggctgcgctcgaccccaatgcgcgcatggcgctcgaaaacccgcccctcgcagcgctt
ttgcctgcgctcacgccaatcttgaagaaccgccacgataaggtccaggaacaaagtatt
ctttttgtcggtctcattgctcgcactggtgcggacaccatcaatgccaaagaatggatg
cgtgtgtgctacgatcttttggatatgctcaagtctacacggcgccgtgttcgtgtagca
gccaatgccacctttggtcacattgccaataccatagggccccaggacgttttggccatg
ttactcgataacctccgggtgcaggagcggcagcttcgtgtgtgtacgggcgtggctatt
gccatagtggctgacacatgtgcaccgttcacagtgcttccagcgctcatgaacgaatac
cgtgtgcccgacaagaatgtacaaaacagtgtgctcaaggcgctcagttttatgttcgag
tatcttgacggcgctaccgcgcggccatatgtgtatgccgtggcgccacttctcatggat
gcgctcacagaccgcgaccaggttcatcgtcagacgggcgccaccgtggtgcgccacttg
gcactcgcttgcgccgcgcgcggcgtgcacgccgatctccaccctgttttcgttcacttt
ttgaatcttgtgcttccaaacatttacgaggtgctgccgcatgtgatatcgcgtgtggtg
gaggcactcgatgcgttgcggattgcagttggtgctggtgtgtatttgaattatgtttgg
gctgggcttttccatgcggcccgcaaggtgcgcacgccctactggaaattgtacaatgcg
gcatatgtgcaacactgcgatctgcttgtgccctgctacccacgccttgaatatgaccag
ctagatgagctcgatgtgtggatataa

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