Clavispora lusitaniae CBS 6936: A9F13_21g00451
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Entry
A9F13_21g00451 CDS
T05147
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clus03041
]
A9F13_21g00451
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_21g00451
Enzymes [BR:
clus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9F13_21g00451
Spliceosome [BR:
clus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
A9F13_21g00451
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
90S particles
Helicases
A9F13_21g00451
Pre-60S particles
A9F13_21g00451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
OVF06221
UniProt:
A0AA91PVP1
LinkDB
All DBs
AA seq
560 aa
AA seq
DB search
MAKKVKSSKRNEQPAKRKHEDEDVSNSDSEKLVNELDEDFDEVAQLLGDNVQDPEKKSSK
QQKKEEKLAEQEVTQSKAIKPAAQENDENDEGEDNYDFEEAGFSEPTLKAIRQMGFKKMT
KVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIELLYSLKFKPRNGTGVVIISPTREL
ALQIFGVARELMEHHTQTFGIVIGGANRRQEADKLVKGVNLLIATPGRLLDHLQNTQGFV
FKNLKALVIDEADRILEIGFEEEMKQIIKILPNEDRQSMLFSATQTTKVEDLARMSLRPG
PLYINVVPESAASTADGLEQGYVVCESDKRFLLLFSFLKRNAKKKIIVFLSSCNCVKYFG
ELLNYIDLPVLDLHGKQKQAKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIVQFDP
PDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAANVPLNEYEFPANKIANVQ
SQLTKLIKSNFWLHQSAKDGYRSYLQAYASHHLKTVYQIDKLDLVKVAKSFGFDVPPKVN
ITIGASGKSVEKKHKKQRRN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaagtgaaaagcagcaagaggaacgaacaacctgctaagagaaagcatgag
gatgaagatgtttccaactcggactcggagaagttggtcaacgagttagatgaggatttt
gatgaagtagctcagttacttggcgacaacgtacaagacccagagaaaaagagctccaag
caacaaaaaaaggaagagaaattggctgaacaagaagtaacccaaagcaaggccattaag
cctgctgcgcaagagaatgacgaaaatgacgagggggaagacaattatgattttgaagag
gctggattttccgagcctacgctcaaggcgatcagacaaatgggcttcaagaagatgacc
aaggtccaggcaaagacgattccaccattgttagctggtagagatgttttgggcgctgca
aaaactggttctggtaagacgttggcctttttgcttccagccattgaacttttgtactcg
ttgaagttcaagccaagaaacggtacaggtgtggtgatcatctccccaaccagagaatta
gctcttcaaatctttggtgttgcacgtgagttgatggaacaccacacgcaaacatttggt
attgttattggaggtgccaatagaagacaggaggctgataagttggttaagggtgtgaat
ttattgattgccacccctggtcgtttgttggaccacttgcagaacacccaaggttttgtg
ttcaagaacttgaaggctcttgtcattgacgaagctgatagaattttggagattggtttc
gaggaggaaatgaagcaaatcatcaagattttgcctaacgaggacagacagtcgatgttg
ttctctgccacacaaaccaccaaggtcgaggatttggcccgtatgtccttgcgtccagga
cctttgtacatcaacgttgtgcctgaaagtgctgcttcgaccgctgatggtttggaacaa
ggttacgttgtgtgcgagagtgataagcggtttttgctcttgttttccttcttgaaacgc
aatgcgaagaagaagattattgttttcctttcgtcttgtaactgcgtcaagtactttggt
gaattattgaattacattgacttgcctgtgttggatttacatggcaagcaaaaacaggcg
aagcgtactaacaccttctttgaattctgcaatgccaagcagggtattttgatctgtact
gatgtggctgctagaggcttggacattccagctgtggactggattgtgcaattcgaccct
cctgatgacccaagagactacattcatcgtgtaggaagaacggcacgtggtacgcaaggt
aagggcaaatcgttgatgtttttgacgccctctgagttgggctttttgcgttatttgaag
gcagccaatgttcctctcaacgagtacgagttcccagccaacaagattgccaatgttcaa
agccaattgaccaagttgatcaagagcaatttctggttgcaccaatcggccaaggacggt
tacagatcgtacttgcaagcatacgcctcgcatcatttgaaaaccgtgtaccagattgac
aagttggacttggtgaaggtggcaaaatctttcggctttgacgttccacctaaggtgaac
attaccatcggggccagcggaaagtcggtcgaaaagaagcacaagaagcaaagacggaac
tag
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integrated database retrieval system
