Clavispora lusitaniae CBS 6936: A9F13_21g00704
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Entry
A9F13_21g00704 CDS
T05147
Name
(GenBank) putative mRNA-binding translational repressor
KO
K18748
protein SSD1
Organism
clus
Clavispora lusitaniae CBS 6936
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_21g00704
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
A9F13_21g00704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
OB_RNB
Rrp44_CSD1
Motif
Other DBs
NCBI-ProteinID:
OVF06242
UniProt:
A0AA91PWH4
LinkDB
All DBs
AA seq
1179 aa
AA seq
DB search
MADGERSRKPKNLYIAHRRSPSELTTLMVEQYNLQRQLEAVQSQQKQLLQQQQSSSSLTV
PQEGYKSHSRNSSTNNANHRRTGSSGGSQQGHARRHSLGLNEAIKAAASQKQSNLASLGS
NATNSPPGLRAASPTLGHSNSSSESLGGFRFPNNAPDSERELSPGHSRSRSLAYGQQFKF
PPENSSFLPPVPGFSSTSPERGHQRRGSHLRSNSRNLDNSNINSNWRSQQQPAGQQYSSA
TLEPPSFFVPGHRNKSSSYGGGGSVSSLSQFNPNMGQGNNNNNGNANGRKSLFAPYLPQM
SLPDLINEGRLVTGTLRVNKKNRSDAYVSTDGLLEADIFICGSKDRNRALEGDLVAVELL
VVDEVWESKKEKEEKKRRKDNNMTKSNTTSVLSDDIHNDATSTSAADSKKENDGESLGRR
GSLKQRPTMKKNDDVEVEGQALLLVEEEEINDEVKPLYAGHVVAVVDRIPGQIFAGTLGL
LRPAQAAQAAMDKKYGKESSVQTPRTPKIVWFKPTDKRVPLIAIPTEQAPRDFVENHEKY
SDSLFIASIKRWPITSLHPFGTLVCKLGKIDDPAIEVDAILRDNNFSCDEYPNENDFAED
YMTSFFGPLPSIEAELTNPDRVEYLNDYIISFTQNNEFVDHAFHVKRLSSTKIEFGFHSA
DVSHFVHPGSLLERKAKKRSCSAFLPQKSSHLYPEQFNKLVSFKENVKNLALSVVFEIDT
TSFEVEDIHIQESVIVPKSLVSYDDVDAILSNKPVEDITSATSDYIKTFALIAKEFRRQR
LENRALGISPTLNLLDQIDDEKVRLHLNIYQSSDALSMVSEISHKVNATVAAKVHAFLGD
EAFLRRHALPTLQKIENFSRKAANLGFEMDISTSASLQNSILKIEDPVKRQCIETLLFKS
MPKPKYYIAGKQDSDSYGHYYLNLPLHTHFTAPLRRFADLIVHRQVKAVINKTTSEPNNL
EALKTIADYCNFKKDCAANAQEQAIHLLLSQTINEMSENTGQLLVMGTVVQVYESSFDVF
IPELGVEKRVHGDQLPLVKAEFDKANRTLELFWEKGVDAATYVPPDEKTSLSYRSSIKNK
YRTSSLEAAKFQGESMKQGGAISSVADKLAKLNIDAPNVGSQGSEEDGLAPYLRDSITRV
EGNSYIQEIREMRQVAVLLRAEIGMALPCLTVRVLNPFA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggcgaaagatcacgcaagccaaagaacttgtacattgcccaccgtcgctct
ccgagcgaattgaccacgcttatggtggagcaatataaccttcagcgccagttggaggca
gtgcaactgcagcagaagcagctcttacaacaacaacagctgctgctgctgcttacggtt
cctcaggagggatataaatctcattccaggaacctgtcgaccaacaacgcaaaccaccgc
agaaccggctctctgggtggttctcaacagggtcatgcacgtagacactccttggggctt
aatgaggctatcaaggctgctgcatcacagaaacaatccaacttggcttcccttggatca
aacgctaccaacagtccaccaggtcttcgtgcagctctgccaacattgggccattctaat
agtagctcagaatctttgggaggattccgctttcccaataatgctccagactccgaacgg
gaactttctccaggccattcgcgctcgcgttcattagcgtatggccaacaattcaaattt
cctcccgaaaactcctcctttcttcctcccgtgccaggtttcagctctacttctcctgaa
cgtggccaccaacgccggggatcccacttgagatcaaattctcgtaatctcgacaatagc
aatatcaattccaattggcgttcacaacaacaaccagctggacaacaatatagctctgca
acattggaaccacctctgttcttcgttcctggccaccgcaacaaatcaagctcttatggc
ggaggcggctctgtttcgtctctatcacaattcaatcccaatatgggccaaggaaacaat
aacaacaacggcaatgcgaacggccgtaagtccctttttgcgccatatttgcctcaaatg
tctttgccagatttaataaacgagggacgtttggtgaccggaactttgcgggtcaataag
aagaaccgttctgatgcctatgtctccacagatggtttattggaagctgatatcttcatt
tgtggctccaaggaccgtaacagagcattggaaggcgacttggttgcagtagagttgctt
gttgttgatgaagtttgggagtccaagaaagaaaaagaggaaaagaaacgtcgcaaagac
aacaatatgacaaagtctaatactacctctgttttgagtgacgatattcataatgacgcc
acgtctactctggctgccgattcgaagaaggagaacgatggcgagagtttggggagaaga
ggctctcttaagcaaagacctacaatgaagaaaaatgatgacgttgaggtggagggccaa
gcattacttctagttgaagaagaggaaattaacgatgaggtcaaacctttgtatgcgggt
catgtggttgccgttgtggatcgtattcccggccaaatctttgctggtacgttaggttta
ttaaggcccgcacaagcagcacaggcagccatggataaaaaatacggtaaagaatcgtct
gttcaaacaccaagaacaccaaagattgtttggtttaaacccacggacaaacgtgttcct
ttaatcgcaatccctacagaacaagctcctcgcgactttgttgaaaatcacgaaaagtac
tcagacctgttattcatcgcctccattaaaagatggccaattacttcgttgcatcccttt
ggaacacttgtgtgcaaattgggtaagattgatgatcctgcaattgaagtggatgcgatt
ttgagggacaataacttttcttgcgacgagtatccaaatgagaatgactttgcagaagac
tacatgacatccttttttgggccacttcctagtatcgaagccgagttgaccaaccctgac
agggtagaatatttgaatgattacattatatcttttactcagaacaatgagtttgttgat
catgctttccatgtgaagagacttagcagcacaaagatcgagtttggtttccactcggca
gatgtgtctcattttgtgcatccaggttcgttgttggaaagaaaggcgaagaagagatcg
tgctccgcatttttaccccaaaaatcctctcatttgtatccagaacaattcaataagttg
gtttctttcaaggaaaacgttaaaaatttggccttgtcggtcgttttcgaaatcgatact
actagttttgaagttgaggatattcacattcaagagtcggttattgtaccaaagtctttg
gtgagttacgatgatgtcgatgctatcttgagcaataaacctgttgaggatatcacttct
gctacttctgactatatcaagacctttgcattaattgccaaagagttccgtcgccaaaga
ttggaaaatcgggccttaggaattagtccaacgctcaatttgttagatcaaattgatgat
gagaaagtgagattgcacttgaatatttatcaatcgagtgatgctttgctgatggtttcc
gagatttctcacaaagtaaatgctactgtcgctgccaaagtacatgcattccttggagat
gaggcctttttacgtcgccatgcattgccaacattgcaaaagattgaaaacttctcaaga
aaagcagcaaatttgggcttcgagatggacatcagcacatcagcaagtttgcagaattcc
attttgaaaatcgaggacccagtcaaaagacaatgtattgagactttgttgttcaaatcg
atgccaaagcctaagtactatattgctggaaagcaagattcagattcatatggacattac
tatttgaacttgccattgcacacacacttcacagcaccattgagaagatttgccgatttg
attgtgcataggcaagtgaaggccgttatcaacaagacaacttcagagcctaacaactta
gaggccttgaaaactatagccgattattgtaacttcaagaaagactgtgctgccaacgca
caggaacaagcaattcatttgttattgtcccaaactattaacgagatgagtgaaaatact
ggtcagttattggtgatgggcacagtcgtccaagtttacgaatcatcatttgacgttttt
attcctgagttgggtgtggagaagagagttcatggtgatcagttgccattggttaaggcc
gaattcgacaaggcaaaccgtacgcttgagttgttctgggaaaaaggtgttgatgcggcg
acgtacgttcccccagatgaaaagacgtcattgagttaccgtagctcaatcaagaacaag
taccgtacatcatcgttggaagcagcaaagttccaaggtgagagcatgaaacaaggcggt
gccattagtagtgttgctgacaagttggcgaagcttaacattgacgcccctaatgtgggg
tcacaaggcagcgaagaggatggattggcaccatatttgcgcgacagcattacacgggtc
gagggcaactcttatattcaagaaatccgtgaaatgcggcaggttgcagttttgttgcgg
gcagagatcggcatggcattgccatgcttgactgtgcgggtgttgaatccttttgcatag
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