KEGG   Clavispora lusitaniae CBS 6936: A9F13_23g00847
Entry
A9F13_23g00847    CDS       T05147                                 
Name
(GenBank) putative nucleoporin
  KO
K14299  nucleoporin SEH1
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    A9F13_23g00847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clus03019]
    A9F13_23g00847
   04131 Membrane trafficking [BR:clus04131]
    A9F13_23g00847
Messenger RNA biogenesis [BR:clus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     A9F13_23g00847
Membrane trafficking [BR:clus04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    A9F13_23g00847
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_NOL10_N Beta-prop_IP5PC_F Beta-prop_WDR41 Beta-prop_HPS5
Other DBs
NCBI-ProteinID: OVF05466
LinkDB
AA seq 340 aa
MRLFETGHDELVHDIKYDFYGRHVATASSDQHVKVFDLDPDSAAWVLNDSWKAHDSSVLK
VSWAHPEFACAQLLASCSYDRSVKVWQESPEELHGSGRRWARLATLAVESYGPIYDVQFA
PPHLGLKLACVGADGIVRVYESPEPADLSVWSLTAEIPILTSQLPTKSLQSSFCIEWCPA
KFCAREMFAVVALDQGFVYCAREQDAPEDTPRFAKLCDLPEHNGLIRSVSWAPSMGRSYH
LIATGCKDGYIRIFKAVEHDNSLKMDVVAELNDHGSEVWRVQWNPTGTILSSAGDDGKVR
LWKCNYMNEWQCMSEINTSNGVEQPGTDDPESAQFRSPAP
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcgtcttttcgaaacgggccacgacgagctcgtgcacgacatcaagtacgatttctat
gggcggcacgtggccacggcgtcgtccgaccagcacgtcaaggtgtttgacttggaccca
gactcggccgcgtgggtgctcaacgactcgtggaaagcgcacgactcgctggtgttgaag
gtgtcgtgggcccaccccgagttcgcctgtgcgcagctcttagcgctgtgtctgtacgac
cgcagcgtcaaggtgtggcaggagctgcccgaggagttgcacggctcgggccgccgctgg
gcgcgcttggccactttggcggtcgagtcgtacggccccatctacgacgtgcagtttgcg
ccgccgcatctcgggctcaagcttgcgtgcgtcggcgccgacggcatagtccgcgtgtac
gagtcgcccgagccggccgacttgagtgtgtggtcgttgacggccgagatccccatcttg
acgctgcagcttccgacaaagagtctccagagcagcttctgcatcgagtggtgcccggcc
aagttctgtgcccgcgagatgtttgccgtggtggcgttggaccagggcttcgtgtactgt
gcccgcgagcaggacgcgcccgaggacactccccgttttgccaagttgtgtgacttgccc
gagcacaacgggctcatccgctcggtcagctgggcgccgtccatgggccgcagctaccac
ctcattgcaacaggctgcaaggacggctacatccgcatcttcaaggccgtggagcacgac
aacctgttgaagatggacgtggtggccgagctcaacgaccacggcctggaggtctggcgt
gtgcagtggaatccaacaggcactattctcagctcggctggcgacgacgggaaggtccgc
ttgtggaaatgcaactacatgaacgagtggcagtgcatgagtgaaatcaacaccagcaac
ggcgtcgaacagccgggaactgacgatccagagtcggcgcagttccgcctgccggcgcca
tag

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