Clavispora lusitaniae CBS 6936: A9F13_24g00605
Help
Entry
A9F13_24g00605 CDS
T05147
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03013
Nucleocytoplasmic transport
clus03015
mRNA surveillance pathway
clus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A9F13_24g00605
09122 Translation
03013 Nucleocytoplasmic transport
A9F13_24g00605
03015 mRNA surveillance pathway
A9F13_24g00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_24g00605
03041 Spliceosome [BR:
clus03041
]
A9F13_24g00605
03009 Ribosome biogenesis [BR:
clus03009
]
A9F13_24g00605
03012 Translation factors [BR:
clus03012
]
A9F13_24g00605
Enzymes [BR:
clus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9F13_24g00605
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
A9F13_24g00605
mRNA cycle factors
Stress granule specific factors
A9F13_24g00605
Spliceosome [BR:
clus03041
]
Complex C
Other components
EJC/TREX
A9F13_24g00605
Ribosome biogenesis [BR:
clus03009
]
Eukaryotic type
90S particles
Helicases
A9F13_24g00605
Translation factors [BR:
clus03012
]
Eukaryotic type
Initiation factors
eIF-4
A9F13_24g00605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
OVF05159
UniProt:
A0AA91SZT8
LinkDB
All DBs
AA seq
397 aa
AA seq
DB search
MEFDRSADAQIEFSSKSTKGVKVHATFESMKLKPELLKGIYAYGFEAPSAIQSRAIMQII
SGRDTIAQAQSGTGKTATFSIGMLQAIDWNVRQCQALVLSPTRELAIQIHNVIRNLGTYM
NIHTHACIGGKQVGDDLKKLNQGQHIVSGTPGRVLDVIKRRNLATRNVQMLILDEADELM
TKGFKEQIYEIYRHLPSTVQVVVVSATLTREVLEITSKFTTDPVKILVKKEDVTLEGIKQ
YHIQCEKEEWKFDTLCDLYDSLTITQAVIFCNTKSKVNWLADQLRKANFAVSSMHGDMKQ
EERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSLVINYDLPLDKENYVHRIGRSGRFGR
KGVAINLITKDDVAEMKDLERYYKIRIREMPSDLSSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatcgttcagcggatgctcaaattgaattttcttcaaagtcgacgaaagga
gtaaaagtgcatgccacttttgagagcatgaagttaaaaccagagcttctcaaaggtatt
tatgcatatggctttgaagctccgtctgcaattcaaagcagggctatcatgcagattatt
tcgggtagagacaccatagctcaagcacaatcgggaacaggaaaaactgccacattctcg
atcggtatgcttcaggcaatcgattggaacgtacgccaatgtcaggcgttggtactttcg
cctactagagagcttgctattcagatccataatgttattcgaaatttgggcacatatatg
aacatccatacccacgcttgtataggaggtaaacaggttggcgatgatttgaaaaagctt
aaccaaggtcaacatattgtgagcgggacacctggtcgagtactagacgtcattaagaga
agaaacttggctactaggaacgttcagatgcttatattggatgaggccgatgagctcatg
accaaaggtttcaaggagcaaatttacgaaatctatcgtcatcttccgtctactgttcaa
gtagtagtggttagtgccacactcaccagagaagttttggagataacttcgaagtttact
actgatcctgtgaagattttggtcaaaaaggaagatgtcacgttggaaggaatcaaacag
tatcacatccagtgtgagaaagaggagtggaagttcgacacactttgtgatttgtacgat
tccttgacaataacgcaagcagtgattttttgcaacacaaagagcaaagtgaactggctt
gcagaccaacttcgaaaagcaaattttgctgtctcttcaatgcatggtgatatgaagcaa
gaggagcgagactccatcatgaacgatttcagaactggtaattcgcgtgttttgatatcg
acagatgtatgggcacgtggaattgatgtgcaacaggtttcattagttatcaactatgac
ttgcctctagacaaggagaactacgtgcatcgtatcggacgttcgggtcgttttggacgt
aaaggagtggcgataaacttaatcacaaaggatgatgttgctgaaatgaaggatttggaa
agatactacaagatccgtattagggaaatgccactggatttatccagcctttga
DBGET
integrated database retrieval system
