Columba livia (rock pigeon): 102083601
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Entry
102083601 CDS
T02912
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X2
KO
K10864
DNA mismatch repair protein PMS1
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102083601 (PMS1)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102083601 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
HMG_WDHD1
HMG_box_5
CHDNT
Motif
Other DBs
NCBI-GeneID:
102083601
NCBI-ProteinID:
XP_005501774
UniProt:
A0A2I0MIS9
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MKQLSAETIRLISSSQVITSVVSVVKELIENALDANATIIDIKLENYGLNKIEVRDNGNG
IKVADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGAICSISEVLVTTMTADDDYSIQ
YTLDSSGHITSKRPSHLGQGTTVTVLQLFNNFPVRKQFYSTNKKCKEELKKVQDLLIAYG
IIKPDLRITLSHNKAVIWQKVRVSNHKMAFMSVLGTAVMGSMVPFQHCCEDPEINLSGFL
PKAESDSSLTSLSSSERSFVFINNRPVHQKEILKLIREYYNMVTQKDSSRLYPVFFLNIT
VPASTVDVNITPDKTQVLLHYKESVLLAVENVLKSLYGPLPAAVPGESNKTDGTSEDVFV
HRTEQTDVVVNKMGPSGNDDLHAHTSFPSFSSNMQNCQAGKNTEICLNHQTFCGDVVHSH
LDKKEVSESDALPHSSLNLLCEEEENRQNMIEIQSNGVTENPKSKKPDKHHLSSDKADKT
EKIEEALGPKDLPEISADSWSMGSGFKSCLGGNLKHIKILVPEAGGTINKQNECAGEQSN
DLQISNQSIKKRNVISEKFGRVRAYDLINGKPIRKARTPMGFFTEERRPQLIDDNPSTRM
EDILLMIGEQWKDLNQDEKRQYEIKAAKDQERYNRDVEKAMGQTAHRSAKEAEKKKSKLK
TSPSNQQKLSKMFNVQIEKKCKPELPVKIVTVPFSLSSCKCQVQRQEKNYSDEHELFLIR
RQSFPDVWMLATEKKLMLLNPYRLEEALLCKRLLMNHKLPVEKLDTPIVLTDSLLGGSQY
MAALYKMRKDSWSFSGSGYLSDPRLVANGFQITVIEGAECHLEIEGIANCLPYYGISDLK
EILKAVVDGNAKEVHECRPLKVINYLEGEAVRLARQLPLHLSKEDVQNKIYRMMQQLGKE
NKGCVHGRPFCCHLADIPEDDKHNSMEIIE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgtcggcagaaactattcgtctcatttcaagctctcaggtgatcacatca
gttgtcagcgtggtgaaggagctgatagaaaatgcgttggatgcaaatgccacaattatt
gatattaaactggagaattacgggcttaacaaaatagaagtaagagacaatggcaatgga
atcaaggttgctgatgtcccagttatggcaattaaacactacacctcaaaaataagttct
tctgaggaccttgagaggttaacaacatatgggttccgtggggaggctttgggagcaatt
tgctccatatctgaggttttagtcacaacaatgacagctgatgatgattacagcattcag
tatactttggacagcagtgggcatataacttctaaaaggccttcccaccttgggcaaggt
actacagtaacagtcctacagttgtttaataattttcctgtaagaaagcagttttactca
acaaataaaaaatgtaaggaagaactgaaaaaagtccaagatctactgatagcatatggt
atcataaaaccggacctgaggataaccttatcacataataaggcagttatttggcagaag
gtcagggtgtcaaatcacaaaatggcctttatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacattgctgcgaagatcctgagataaatctttctggatttctc
ccaaaagctgagtcagacagttctttgacaagcctttcgagttcagaaaggagttttgtt
tttataaataatcgtccagttcatcagaaggaaatactaaagttaattcgagagtactac
aatatggtgacacaaaaggactcttctcgtttgtaccctgttttctttttgaatattact
gtacctgcctctactgtggatgtgaatataacacctgataaaactcaagttttactgcat
tataaggaatctgtcttacttgctgttgaaaacgtgttgaagtcactgtatgggccacta
cctgctgcagtccctggtgaaagtaataaaacagatggtacctcagaagacgtgtttgtt
catagaacagaacaaacagatgtggttgttaacaaaatgggaccatctggaaacgatgat
ctgcacgctcatacttcattcccttcatttagcagcaatatgcaaaactgtcaagcagga
aaaaacacagaaatctgtttaaatcatcagacattttgtggtgatgttgtacatagtcac
ctggacaaaaaagaggtttctgagagtgatgcccttccacacagttccttaaatttattg
tgtgaggaggaagagaatagacagaatatgattgaaattcaaagtaatggtgttactgag
aaccccaaatctaaaaaacctgacaagcatcatttgagttctgataaggctgacaaaaca
gaaaaaattgaggaagcattaggccctaaagatttacctgaaatctctgctgatagttgg
agtatgggaagtggatttaaaagctgtttaggaggcaacctgaagcacattaagattttg
gttcctgaggctggaggaacaattaataagcaaaatgaatgtgccggtgaacaaagcaat
gatctgcaaatctcaaatcaaagcataaagaaaagaaatgtgataagtgagaaatttgga
cgtgtgagggcttatgacttaattaatggtaaaccaatacggaaagcaaggactccaatg
ggatttttcactgaagaacgtcgtccgcaattgatagatgataatccaagcaccagaatg
gaggacatcctgctgatgattggagaacagtggaaggatttgaatcaagatgaaaaaagg
caatatgaaataaaagctgccaaagaccaggaacggtacaacagagatgttgagaaagct
atggggcagacagcgcaccgatcagcaaaggaggcagaaaaaaagaaatccaagctgaag
acttccccatccaaccagcagaagcttagcaagatgtttaatgttcaaattgaaaagaag
tgcaaacctgaactgcctgtgaaaattgtgacagtgcctttttctctgagttcctgtaaa
tgtcaggttcaaagacaagagaaaaattattcagatgaacatgagcttttcttgatccgt
cgtcagagttttcctgatgtctggatgcttgctactgaaaaaaagctgatgttgctgaat
ccatatagattggaagaagccctgctatgtaaaagattactgatgaatcataagcttcca
gtagagaaactggacacaccaattgtgttaacagacagtcttcttggtggatctcagtat
atggctgctctttataaaatgcggaaggattcctggagtttcagtggctcgggttatttg
tcagatccaaggcttgtagcaaatggtttccagataacagtgatagaaggtgcagaatgc
catctggaaatagaagggatagctaattgtctgccctattatggtatttctgatttgaaa
gaaattctgaaggcagtagttgatggaaatgcaaaggaagtacatgaatgtaggcctctc
aaagtgataaattacttggagggagaagcagtacgtttagctcggcagctgccattacat
ttgtcaaaagaagacgtacaaaacaaaatttacagaatgatgcaacagcttggaaaggaa
aataaaggctgtgttcatggtcgtcctttttgttgtcacttagcagatattccagaagat
gacaagcacaactccatggaaattattgagtaa
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