Columba livia (rock pigeon): 102083626 Help Entry 102083626         CDS       T02912                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X5   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism clv  Columba livia (rock pigeon) Brite KEGG Orthology (KO) [BR:clv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:clv03000]     102083626 (RC3H1)    04121 Ubiquitin system [BR:clv04121]     102083626 (RC3H1) Transcription factors [BR:clv03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     102083626 (RC3H1) Ubiquitin system [BR:clv04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     102083626 (RC3H1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 FYVE zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_10 zf-RING_6 Motif Other DBs NCBI-GeneID:  102083626 NCBI-ProteinID:  XP_005507981 UniProt:  A0A2I0ME89 LinkDB All DBs Position Unknown AA seq 1123 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IDLLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE GGVDLPSRKTPALPNGIVSTGSTVTQLISRGTDSSYETALKPGKMDHLSSSAPGSPPDLL ESVPKSSISALPVNPHPVPARAPADLPSVSVAKQLHMVPRGSQLYNTPQADMFYQDPRGA APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY PPMGQPIYPPHYDSRRVYPPVQPYQREEMVRGSPVPIEIPPVAVPPYVPESRDRYQQTEG YCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVESKAMR DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMPAMAVQGATTKSI ISDYNPYGTHSGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRME LQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPAPPPKWPGMISSEQLSLELH QVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKAPAEDLALTFSDVPNGS PLTQENIGLLSNKTASLSLSEDPEGGGDNQDSQRAGVSPTSAP NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacacagact ttcgacgaaacgattcggaagcccatcagcttgggttgcggacacactgtctgcaagatg tgcctcaacaagctccaccgtaaggcatgtccctttgaccagaccactatcaacacagac attgacctcctgcctgtgaactcagccttgctgcaactagtgggtgctcaggttcctgag cagcagccaattactttatgtagtggagctgaagacaccaagcattatgaggagggcaag aagtgtgtggaagaattagcattgtacctcaaaccactgagcagcgcaagaggtgtgggt cttaacagtactactcagagcgtgctaagtcgtcctatgcaaaggaaacttgtgacgtta gttcactgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcgcggtca ctcggtgaaagaacagtcacagagctcatccttcagcatcaaaatcctcagcagctctcc tccaacctctgggctgcagtgagagccagaggatgccagttcctcggaccagcaatgcaa gaggaggctttaaagcttgttctgctggctctggaagatggatctgctttatctcggaag gtcttggttctctttgtggttcagaggctggagccgcgatttcctcaggcttctaagaca agcattgggcacgttgtccagcttctttacagagcctcgtgcttcaaggtgacaaagcga gatgaggattcctccctgatgcaactgaaggaggaatttcgcacttacgaagctctgaga agggaacatgattcccagatagttcaaattgctatggaagcaggtctacgcattgcacca gatcagtggtcctcactgttatatggagaccaatctcacaaatcccacatgcagtctatc attgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattaactattgct cttcagaggactggagatccagctaacctgaatcgtcttcgaccacacctagagctcctg gcaaatattgatcccagtccagatgccccacctccaacatgggaacaactggaaaatgga ctagttgctgtgaggactgtggttcatggcttagtcgactatatccagaatcacagcaaa aaaggaacagatcagcagcagcctcctcagcacagcaagtacaagacatacatgtgccga gacatgaaacagcgaggaggatgcccccgaggcgccagttgcaccttcgcacattcgcag gaggagctggaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagc gcatccctgggccagctgaacgaggtgggcctgccttcaggagctatcctctcggaggaa gggggagtggacttgcccagtaggaaaactcctgctctgccaaatggaattgtgtcaaca ggcagcacggtgacgcaacttatttctcgagggactgactccagttatgaaacagctctg aagccggggaagatggaccatctgagtagcagtgcccctggatccccccctgacttgctg gaatctgtccccaagagctctatttctgccttaccggtcaaccctcatcctgtgcccgct cgggccccagcagatctgccttcagtgtctgtcgccaagcagctgcacatggtaccccga gggtctcagctgtataacactccgcaagcagatatgttttatcaagatcctagaggagct gccccaccatttgagccagcgccctaccaacaaggagtttactatcccactcagtccatg tctcgctttgtccgacctcctccatcagctcctgaacctgggccaccttatttagaccat tacccgccctaccttcaggatcgcgtggtgagcccccagtacacacagccgcagcagtac cctcctatgggacagcccatatatccaccgcactacgacagccgtcgcgtgtatcccccg gtccagccgtatcagcgagaggagatggtgcgaggaagcccagtgcccattgagataccg ccagtggccgtacctccctacgtacctgaatccagagacagataccagcaaacagagggg tattgcccagtggcgccgcatcttggtcagatcagaccttcatgccacaggcctcatccc agcctggatgaacttcaccgacgaaggaaagagatcatggcccagctagaagagaggaaa gtgatttctccacctccttttgcaccgtcaccaactttgcctcacccctttcattcagag gagtacttggatgaagacctgaaggtagctgggaaatacaaaggaaacgactatagccag tactctccctggtcctgtgacaccatcggctcctatattggaaccaaagatgcaaaaccc aaagatgtcgtggcagcaaggagtgtggagatggcgaatgtggagagtaaagccatgcgt gaccagcgattagacatgcagaggagagcggcagagactggtgacgatgacctcattccg tttggagaccggccaactgtgtcgagatttggggccatctctcgtacttccaaagcgatg taccagaattcgggtcccatgccggccatggcggttcagggagctaccaccaaatcgatc atttcagactacaatccttatggaactcacagtggctggggaggctctccatattctcct catcaaaatataccttctcagggacgtttcaatgacagggagagactgtccatgtcagat gtggctggtcatgggaaacagttgccctcagctgaacgagagcagcagctgcgcatggag ctgcagcaagtagaccatcagattagccagcagacacaaatgcgaggcctagaggctgtt agtaacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagccccca gccccacctcccaagtggcctgggatgatctcaagtgagcagctgagcttggagctacac caggtggaaagggaaattgggaagagaacccgggagctgagcatggagagtcagtcttca ctggatataaaaaacaaactgggcaccactaaacagacagaaaatggacagttagagccg caaagcaaggctccagctgaggacctcgcactgacattcagcgacgttccgaacggatca cccttgacacaggagaacattggcctcctgtccaacaagacagcatctctcagcctgtcg gaggacccggagggaggaggagacaaccaggactcccagagagcgggagtttcgcccacg tctgctccatga

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