Columba livia (rock pigeon): 102083761
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Entry
102083761 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102083761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102083761
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102083761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
MUN
DEAD
Chromo_MIT1
HDA2-3
Myb_DNA-bind_7
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
102083761
NCBI-ProteinID:
XP_021139227
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
TEDLDIKITDDEEDEELDVTGPVRAEPPPPPPEHEGETLPSMQFFVENPSEEDAAIVDKV
LAMRVVKKELPSGQFTESEEFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKRFKTKMTQ
MRHFFHEDEEPFNPDYVEVDRILDESHGVDKDNGEPVVYYLVKWCSLPYEDSTWELQEDV
DEAKIAEFRRIQARRPEPKRLPRPQAGAWSKLEASRQYKNHNRLREYQLEGVNWLLFNWY
NRWAARFWGDFRLXXXXXXXXXXXXVHGAGLRGPFLVIAPLSTIANWEREFNTWTPMNCI
VYHGSLASRQMIQQYEMYCKDARGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVII
DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAEFLK
DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK
NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILSEFRDSCPHHVPPDFHLQ
AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRVRGN
LRQXRFSKADSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQVGGHLGGVPLG
RSCAFWEVSGGLCLPNLSSADRDDVRSSSKWGLQELWVGFLHQTWVSGPRVGVSQPWAGV
PSPQIQQFSKKEIEDLLRKGAYAAIMDEDDEGAKFCEEDIDQILLRRTTTITIESEGKGS
TFLMVGGSLMVGGCSWLSPGAVGHSWLVGAHGCPPGRRSSRLSPQNTLVIDTPRVRKQTR
HFSTLRDDDLVEFSDLDSXXXXXPRARRQPVLQQPYGRTDCFRVEKHLLVYGWGRWREIL
SHGRFKRRLSERDVESVCRAILVFCLLHYRGDPGVKSFIWDLISPPENGRARHLLNHAGL
PSPVPRGRKGRRLKAQGALEAHKAEWVRRYNPDALFQDDGYKKHLKHHCNKVLLRVRLLS
FLRQELLGDQAHKVLAGAAATWLGMVNHLLEVLWGFFFKHGYERYHTMRADPALCFLEKA
GRPDDTAIMAEQRLGGAEGVGGLRSHFGGIWAFFWHFEAQPKRFRRRRWTRREQADFYRV
ASTFGVEFDPDAGRFRWGRFRIMAGLDKKTDENLTKFYHAFVAMCRQVCRLPPAPGDGTG
GAGTRLGGLVVSPGGLGTVLGGWGCLHGVWWRLHGVNQPNQDLDQPNQDLDQPNDDFDQP
NNNFDQPNEDFDQPNNDFDQAHGLPQPNQDLDQPNEDLDQPNDDFDQPIDDFDQPNQDLD
QPNDDFAQPNNDCAQPHDDFAQPHGLSQPNQDLNQPNQDHDQPNDDF
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
acggaggacctggacatcaagatcacggacgacgaggaggacgaggagctggacgtgacc
gggcccgtgcgggccgagccgccgccgccgccgcccgagcacgagggcgagacgctgccc
tccatgcagttctttgtggagaaccccagcgaggaggacgcggccattgtggacaaggtc
ctggccatgcgggtggtgaagaaggagctcccgtcgggtcagttcaccgaatccgaggag
tttttcgtcaaatataaaaattactcgtacctgcactgcgaatgggccaccatcgcccag
ctggagaaggacaagaggatccaccagaaactcaagcgtttcaagaccaaaatgacccaa
atgcggcattttttccacgaggacgaggagccgttcaaccccgactacgtggaggtcgat
cgcatcctggacgagtcgcacggtgtcgataaggacaacggcgagcccgtggtgtactac
ctggtgaagtggtgctcgctgccctacgaggacagcacctgggagctgcaggaggacgtg
gacgaggccaagatcgccgagttccgccgcatccaagcgcgccgcccggagcccaagcgc
ctgccgcggccgcaggccggagcctggagcaagctggaggcgtcgcgccagtacaagaac
cacaaccggctgcgcgagtaccagctggagggcgtcaactggctgctcttcaactggtac
aacaggtgggcagcgcgcttttggggcgatttccgcctnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnaggtgcacggcgccggcctgcgcgggcccttcctggtcatcgcgccg
ctctccaccatcgccaactgggagcgcgagttcaacacctggacgcccatgaactgcatc
gtgtaccacggcagcctggcctcgcgccagatgatccagcagtacgagatgtactgcaag
gacgcgcggggccgcctgatccccggcgcctacaagttcgacgcgctgatcacgacgttc
gagatgatcctgtcggactgcccggagctgcgggagatcgagtggcgctgcgtcatcatc
gacgaggcccaccgcctcaagaaccgcaactgcaagctgctcgacagcctcaagcacatg
gacctggagcacaaggtcctcctgacgggcaccccgctgcagaacacggtggaggagctc
ttcagcctcctccacttcctggagccgtcgcagttcccgtccgaggccgagttcctcaag
gacttcggggacctcaagaccgaggagcaggtccagaagctccaggccatcctgaagccc
atgatgctccggcgcctgaaggaggacgtggagaagaacctggcgcccaagcaagagacc
atcatcgaggtggagctgaccaacatccagaagaagtactaccgcgccatcttggagaag
aacttctccttcctgtccaagggcgccgggcacaccaacatgcccaacctgctcaacacc
atgatggagctgcgcaagtgctgcaaccacccctacctcatcaacggcgccgaggagaag
atcctgtccgagttccgcgactcgtgtccccaccacgtgccccccgacttccacctgcag
gccatggtccgctcggccggcaagctggtcctcatcgacaagctcctccccaaactcaag
gccggcggccataaggtcctcatcttctcccagatggtgcgctgcctggacatcctggag
gactacctcatccagaagaggtacctgtacgagcgcatcgacgggcgcgtgcgcggcaac
ctgcggcagngccgcttcagcaaggcggactcggaccgcttcgtgttcctgctgtgcacg
cgcgccggggggctgggcatcaacctcacggccgccgacacctgcatcatcttcgactcc
gactggaacccccagaacgacctgcaggtgggcggccatcttggcggcgttcctttgggg
cgttcctgtgcgttttgggaggtctcgggtggtctttgtcttcccaacttgagctcggcc
gaccgcgatgacgttcgttcctcaagcaaatggggtcttcaggagctttgggttgggttt
ctccaccaaacgtgggtctcgggcccccgggttggtgtttctcagccgtgggccggcgtc
ccgtccccccagatccagcagttctccaagaaggagatcgaggacctgctgcgcaaaggc
gcctacgccgccatcatggacgaggacgacgagggcgccaagttctgcgaggaggacatc
gaccagatcctgctgcgccgcaccaccaccatcaccatcgagagcgagggcaagggctcc
accttcctcatggttggtgggtcactcatggttggtgggtgctcatggttgtcccccggg
gcggtgggtcactcatggttggtgggtgctcatggttgtcccccggggcggcggtcatcc
cggctgtccccgcagaacacgctggtgatcgacacgccgcgcgtgcgcaagcagacgcgc
cacttcagcaccctgcgcgacgacgacctggtggagttctcggacctggacagcngannn
nnnnnnnngccgcgcgcgcgccggcagccggtcctgcagcagccctacgggcggaccgac
tgcttccgcgtcgagaagcacctgctggtctacgggtggggccgctggcgggagatcctg
tcgcacgggcgcttcaagcggcgcctgtcggagcgcgacgtggagagcgtctgcagggcc
atcctggtgttctgcctgctgcactaccgcggcgaccccggcgtcaagagcttcatctgg
gacctcatcagcccgcccgagaacggccgcgcgcgccacctgctcaaccacgccggcctg
ccgtcgccggtgccgcgcgggcgcaagggccgccgcctgaaggcgcagggcgcgctggag
gcgcacaaggccgagtgggtgcggcgctacaacccggacgcgctgttccaggacgacggc
tacaagaagcacctcaagcaccactgcaacaaggtgctgctgcgcgtgcgcctgctgtcc
ttcctgcgccaggagctgctgggggaccaggcccacaaggtcctggccggcgccgccgcc
acgtggttggggatggtcaaccatctccttgaggttctttggggttttttcttcaagcac
ggctacgagcgctaccacaccatgcgcgccgacccggcgctctgcttcctggagaaggcc
ggccggcccgacgacaccgccatcatggccgagcagcggctggggggcgccgagggggtc
ggggggctgcgaagccattttggggggatttgggcgtttttttggcattttgaggcccaa
cccaagcgtttccggcgccgcaggtggacgcgccgcgaacaggccgatttctaccgcgtg
gcctccacgttcggggtggagttcgaccccgacgccgggcgcttccgctggggccgattc
cgcatcatggccgggctggacaagaagacggacgagaacctcaccaagttctaccacgcc
ttcgtcgccatgtgccggcaggtctgccgcctcccgcccgcgcccggagacggtacgggg
ggcgctgggacacgtttggggggtttggtggtatctccggggggtttggggacggttttg
ggaggttggggatgtctccatggggtttggtggcggctccatggggtcaaccaacccaac
caagaccttgaccaacccaaccaagaccttgaccaacccaacgatgactttgaccaaccc
aacaataactttgaccaacccaatgaagactttgaccaacccaacaatgactttgaccaa
gcccatggtctcccccaacccaaccaagaccttgaccaacccaacgaagaccttgaccaa
cccaatgatgactttgaccaacccattgatgactttgaccaacccaaccaagaccttgac
caacccaatgatgactttgcccaacccaacaatgactgtgcccaaccccacgatgacttt
gcccaaccccatgggctctcccaacccaaccaagacctcaaccaacccaaccaagaccat
gaccaacccaacgatgacttt
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