Columba livia (rock pigeon): 102083881
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Entry
102083881 CDS
T02912
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102083881 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102083881 (SMG5)
03032 DNA replication proteins [BR:
clv03032
]
102083881 (SMG5)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102083881 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
102083881 (SMG5)
DNA replication proteins [BR:
clv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
102083881 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
102083881
NCBI-ProteinID:
XP_021137935
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLL
LYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQN
ELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFE
GAYGNLKRLYDKAAKMYHQLKKCETRRLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLD
SELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSV
HSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDDQEPREP
LNSIEKDAEAHVANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDS
SQGSTKGSDGSESGSEKSDVEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKS
GPKEALNCVDGSGLGDSKSPSISKSEAADPAVNGPASLSANDASIASNLQAMSTQLFQTK
RCFRLAPTFSNILLKPNSEQPVLKDGIESKPCVNGDLDKPSLVEQDDVSESEESISSYKS
CRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPS
AADLQESGLALSNEVKDILSGAELPDLKANLLLPEDVALRNLPPLKNAHKRFNFEQDRPI
FSAVEESVVRICCIRSFGHFITHLQGSILQFNAELGIFISIAQSEQDNLLHQAQAQFHMA
AEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQLA
ASGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKL
KRQDLDAWNLYKILDSCKQLTVSQGSGEDDTAGMVTIITGFQLEDRSAFSAPMQSAIQAA
ANANVEIKNVLEFYKQWKEMG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgcatccagtggattatggaagaaaagcagaagaactgctctggagaaaagtt
tactatgaagttatccagctcattaaaacaaataaaaagcacatccacagccgtagcact
ctggagtgcgcgtaccggactcacttagttgctggcataggattttaccagcaccttctg
ctctacatccagtcccactaccagctggagctgcagtgctgcatcgactggacacacgtc
accgaccctctcataggttgcaagaaacccgtgtctgcgtccgagaaggagatggagtgg
gcacagatggcgtgtcacaggtgtctggtttatctgggagatctggctcgctaccagaac
gaactggcaggtgtggacacagagctgctggctgagcgattttactatcaagctctatct
gttgcaccgcaaattgggatgccctttaaccagctggggacactggcagggagcaaatac
tacaacgtggaagcgacttattgctacttacgctgtatccagtctgaagtgtcctttgaa
ggtgcctatgggaacctgaagcggctctacgacaaagcagccaaaatgtatcaccagctg
aagaaatgtgagaccaggaggttgtcgccgagcaagaaacgaggcaaagacattaagagg
ttgctggtgagctttatgtacctgcagagccttctgcagccaaaaagcagctctctggat
tctgagctgacatctctctgccagtccgtgctggaggatttcaacctctgcttgttctac
ctgccttctcctcctaatctgagttcaactagtgaagatgaagaagagtatgagagtggc
tactccttccttcctgatctcctcatctttcgcatggtgatcatctgcctcatgagtgtt
cacagcctcaagcgggcaggttcgaagcagtacagcgcagccatcgctttcacgctggcg
ctcttctctcatctgataaaccacgtcaatattcgcctgcaggcagagctagaagaaggg
gagaatccagtcccagcttttcagagcgatggcacagatgaccaggagccgcgggagccg
ttgaactcgattgagaaggacgctgaagcccacgtggcgaatcatcagcccagcgaggaa
cagcggaagaacgactgcaagaaaagcaagaaatactcccgcctttcctgtctgcgtcgc
cgccgccacccccagaaggtggatgagagtgacctgagcgagggcttcgactcggactcc
agccagggctccacaaagggcagcgatggctcagaaagcggctcagagaagagcgacgtg
gaagcagaagctgcttttgatgtggagacggactctgacatgaacagccaagaatctcgc
tccgacttggaggacatggaggacgagccgggtgaggagggaagcggccgaggcaaaagt
gggcccaaagaggccttaaactgtgtggatggcagcgggctgggggactccaagagcccg
agcatctcgaaaagcgaggctgcggacccggccgtcaatgggccagcatcccttagcgct
aacgacgcgagcatagccagtaacctccaggccatgtccacccagctgtttcagaccaaa
cgctgctttcgcttggctcccactttcagcaacatcctcctcaaacccaacagcgagcag
cccgtcctgaaggatggaatcgaaagcaaaccgtgtgtcaacggagatctagataagccc
agcttggtagagcaagatgatgtgtctgaatcggaggaaagcatttcgagttacaaatcc
tgcagaaacgagcgatcccttcaggagaagctggagatcgtgaccaacgaagggctgctg
ctcactgtcaaggtgttcctggactggctgaggacaaacacagacctcatcatcatgtgt
gctcagagctcccagagcctgtggaacaggctgtctgtgctcctcaacctcctgccttct
gctgccgacctgcaggaatcagggctggccctgtctaacgaagtcaaagacatcctgagc
ggtgctgagctcccagacctgaaagccaacttgctgctcccagaagatgtggccctgcga
aatcttccccctctgaaaaatgcacacaagaggtttaactttgagcaggaccggcccatt
ttctcagcggttgaggagtccgttgttcgcatttgctgcattcggagcttcggccacttc
atcacccacttgcaaggcagcatcctgcagttcaacgcagagcttgggatcttcatcagc
atagcccagtcggagcaagacaacttactgcaccaggcccaagcccagtttcacatggct
gcagaggaagctcgtcggaacaggctaatgagagatatggctcagctccgactgcagctg
gaggtttcgcagctggaggggagtctccagcagcccaaagcacagtcggccatgtcaccg
tatcttgtccccgacacccaggccctttgccagcacctggctgttgtcaagcagctggcc
gccagcgggaggttcatcatcatcatccctcgaacagtgatcgatggcttagacttcctg
aaaaaggagaacgcaggtgctcgggacagcatccggtatctggaggcagaatttaaaaag
ggaaacaggtacattcgttgccagaaagacgtggggaagagctttgagaggcacaaattg
aagagacaagatttagatgcctggaatctctataaaatcctggacagctgcaaacaactg
acggtgtcccaggggagcggagaggatgacaccgcgggaatggtcaccatcatcacgggc
tttcagctggaggaccggagcgcgttctcagcacccatgcagtctgccatccaggcagcc
gccaacgccaacgtggaaataaagaacgttctggagttctacaagcagtggaaggagatg
ggctga
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integrated database retrieval system