KEGG   Columba livia (rock pigeon): 102083975
Entry
102083975         CDS       T02912                                 
Symbol
ELL
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102083975 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clv01009]
    102083975 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clv03021]
    102083975 (ELL)
Protein phosphatases and associated proteins [BR:clv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102083975 (ELL)
Transcription machinery [BR:clv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102083975 (ELL)
    Little elongation complex (LEC)
     102083975 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL OrgC
Other DBs
NCBI-GeneID: 102083975
NCBI-ProteinID: XP_013223434
LinkDB
Position
Unknown
AA seq 680 aa
MGGVARKQIFPPCLSLGKRKLCLGSRIRRVSRLSPGSPFLREPEEGAALARRDSEPSWPF
EVVPCAAALAGGVVWCGVVWCGVAGLIKSQQLIKSLTRGALARRRELVNQGETAIKPTGA
REKDAVTSKPVIQFQGSQGHIAIPRPDRPAEVRTFTFYLSNIGKDSPQGSFDCIQQYVSS
NGNIHLDCLGSIQDKITVCATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQV
RKPAPGASDAVPSRKRPTPVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRL
QKDGLSQQDKDLLDNLLQQVANLSAKDSTFTLKDCVYKEVQKDWPGYSEGDQQLLKRILV
RKLCQPQNSSGFQGEAPSLSPPKDSVNSSSPPQKRSQPVEFIDPLANKKPRISHLAHRTQ
PTFNGKFSSSNGKDAPAPALPPAPPESVSSSSNLXHDPLCDVSNDLTHNGRDSESAEPAD
RLGPPVSTDCPQTSKHNCGSYVKTKKKSKKHKDKEKERKEKKSEEKCKEEKQDCEVIKNA
DLVSVPQEQVTGLNGTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYR
DLHARIERITRRFTQLDAKLKQLLQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEY
LHNKLAHIKKLIAEYDQQQF
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgggcggagtagcaaggaagcaaatttttccaccctgcctgagcttgggcaagcggaaa
ttgtgccttggaagccgtataaggcgagtgagtcggctctcgccgggctcacctttcctc
cgggagccggaggagggagcagccctggctcgcagggacagcgagccctcctggcccttt
gaagtcgttccctgtgcggccgcgctcgccgggggtgtggtgtggtgtggtgtggtgtgg
tgtggtgtggcaggcctgattaagtcgcagcaactcattaagtccctgactcgtggggct
ttagcacgaaggcgtgagctcgtgaatcagggtgaaactgccataaaaccgactggagcc
agggagaaggatgctgtgacatccaaaccagtcatccagttccaaggaagccaagggcac
atcgccatccccaggcccgatcgaccggcggaagtgcggaccttcacgttttatctctcc
aacattggcaaggacagcccccaggggagctttgactgcatccagcagtatgtgtccagc
aatggcaatatccatttggattgccttggaagcatacaggacaaaatcaccgtgtgcgct
actgacgattcgtaccagaaggcgaggcagagcatggcccaggccgaggaggagacgcgc
agccgcagcgccatcgtcatcaaacccggcggcagatacgtgggcaaaaaggttcaggtg
cgtaaacctgcaccaggagcttccgatgctgttccctccaggaagcgcccaacgccagtc
aaccttgccagtgcaataaagaggggcaatagtgccatttctcagagacccttcaaagat
agggttgtgcacttgctggcactaaagccttataagaaacctgaacttattctcagattg
cagaaggatggactttctcagcaggacaaggatttgctggacaaccttctgcaacaggtg
gcaaacctgagtgccaaggacagcaccttcacgctgaaagactgtgtgtacaaagaggtg
cagaaggactggcccggctactcggaaggagatcagcagttgctgaagaggatactcgtt
cggaagctctgccagccccagaacagcagcggtttccagggagaggcgccttccctgagc
ccacccaaggacagcgtgaactccagctctcctccccagaaacgatcccaacctgtggag
ttcatcgatcccctggccaacaaaaagcccaggatttctcacttggctcacagaactcaa
cccacgttcaacgggaagttcagctcctccaacgggaaggacgcgcctgcccccgcgctg
ccgccggcgccgccggagtcggtgagttccagctccaacctgnnccacgatcccctgtgc
gacgtcagcaacgacctgacgcacaacggcagagactctgagagcgcggagccggccgac
aggctgggcccccccgtgtccacagactgtccgcagacgagcaagcacaactgcggctcc
tacgtcaaaaccaagaagaagtccaaaaagcacaaagacaaggagaaggagaggaaggag
aagaaaagtgaagagaagtgcaaagaggagaagcaggactgtgaagtaataaaaaatgct
gacttagttagtgttccccaggagcaggtcacaggtttaaacggaacatgcaataattct
agtgtaccaacatcaacttcagaaatgccagattatttattaaaatatgcagccatttcc
tcttcggagcagcgtcagagttacaaaaacgacttcaacgccgaatacaacgagtacaga
gacttgcacgcccggatagagaggataacccgacggtttacgcagttagacgccaagctg
aagcagcttttgcagggctctgaagaatataagaccatccatgatcaaattttacaggaa
tatcggaaaattaaaaagactaaccccaattacagccaggagaagaaccgctgcgaatac
ctccacaacaaactggctcacatcaaaaaactgatagcagagtacgaccaacagcagttc
tag

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