Columba livia (rock pigeon): 102084124
Help
Entry
102084124 CDS
T02912
Symbol
SEC16A
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102084124 (SEC16A)
Membrane trafficking [BR:
clv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102084124 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
BTHB
Motif
Other DBs
NCBI-GeneID:
102084124
NCBI-ProteinID:
XP_013226063
LinkDB
All DBs
Position
Unknown
AA seq
2449 aa
AA seq
DB search
MQQPPQPVPAGAAAPPPAGIARNMYWRNSSLGKRGNAPAAPVQPVTDPFAFGRQTPQGSP
LDNPSKGNALVMQGSSPAGFPQPAVLHASPSHAGDNPHGPHTSLSAPVSQPGINTSSFSN
VPIPSLSPGYVINSTAEVHPNADLGLHGAAVPLHYNTGAAVENSLGVHPGMVSASNKPGV
RQDVSRDPSDVPSGPNATALFPPPPQQPVSQWRPVPGNLQSPVRNFVPHPELSSQTDVQN
ISQSSVSTSHPPPQTNLQQAPINQGIPQNIMQAPLSVGCEKNGKNGSANSHPMNSIQPGN
VFRHNAEMTNAWLNQPYQEQFYPQPPLQDSGFVIPAAQESNPKNQSPDMSGKSNRPIPAD
RDSGTLSMFFKGDEAENEEILSSEKNYVVEKTEFDACQTNSPSLYHPPMHPQRVATNVLS
QAQTGTGSANEMVQRGMDAQYFPXXXXXKHSVFAGDDKTRIGDTSGHGGSQYENVENLEC
IQNQEVLPSEPHNISAAPPAAGPDLYRYGSFPGHALPKNAVVSHAEGGPNLEAPDSLPHP
VRPDSVSSNYSNISHRSASSSARPQEQVGXKNDEESSAIFFKQIDSSPLGGDSSELNLSK
NYHGNLSQPPTPSPPKPTGVFHTSANSSFEPVRSHGVGIKPAEIDQAKMVVELRENHSNQ
KSIKKNTAVPVASPGNLEQPPDNLETIFMPQVHPLPLAVTGEAGNMLHSGPTMENLQSVS
ERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQTVEVIQPPEE
LPSNQQPSKPGTIPVQLSQDGNISSENLENPPKMGEEEALQSQASSGYASLLSSPPTESL
QNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENNQPMKDSGVGDKPAMGPQTSHAGGI
ISGENMPLPAMQVGSLLVNALPNTSLLKHNLLQSPVNSSDTASNQPANLLMKTPPNLAPE
GQKNVNMEGFVPEFASKPGSNSSVSPGTYLPSGSANALVSPVNSIVQANNSANHSNSKEA
AAGVLDFTVSRTLEKSSASNSVQVHNQSLSGGPVYPQQSAGGAGQVGPEMHDNQHFYQQV
TKDVQAVSDRAVQGVLPSPPQMQAAQMQQPPSSGPSSVPLNYQSATGTKVPQVSQQQENQ
VLNNHPQPAGSQEASSAQPTRYDQTSPDKQPASGQPSGAPPSTTPSTTSQSVTPSAQQDL
QRPSLPQTPQEAFGPPQNPYYYYRHPYDAYQPPYPPPYPPADPRTAAHLYYMDDSYGQYD
PRYRHYESGTAYVEPGSYRYAEPERPSSRASHCSDRPSSRQGYTEDYYPKSGWSDYYPGY
YPNSYDYGDPSRWDHYPSVYDPRYRDPRGYDQRYWYDAEHNPYQKRDGYPYSSRYDRYED
NWRYDPRFAGSFDDESEPHRDPYGDDFDRRSVHSEHSGHSLRSSRSIHSHQSSFSSRSQQ
SQLYRSNHDLTANAYETTAQAVSLHTDYPYGGYPANFDGQQPFTDYGYAAEPGWPAVEQA
PLRPSTPEKFSVPHICARFGPGGFLIKVLPNLPSEGQPALVEIHSMETMLQHSPEQEEMR
AFPGPLAKDDTHKVDVINFAQNKATQCFKNEHLIDKESASLLWDFIVLLCRQNGTVVGTD
LAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEAQLSFLTDSLITTIDSLEK
ETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQ
TVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLASKGLL
DAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFFKFATNEAIQRTEAYEYAQSLGTQP
GCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSPVLIGQLIQMSSQLR
LFDPQIKEKPEQESSIEPSWLVRLRHVDGQIKEGAIAYNTDRSTPPPYACSTPSSELDRA
SQCDGAGVGRDVGPGAENPLFASLLPNMAQQMQSVQLMPSVPQAVLDGSAAMIPPGDQEP
VQSVPFYSVASQSGPGFAPPGFSNPYGIEPSPVYLGSALPPGGPPQEVEPRTEEQTNLET
GMQRIAPDSXKKKREEDFYGRMASMAPGRRSRSASQSSAHMGYGRRSRTTSESSAHSVGR
ERSSSVANQPSPPPSAPAXXXXXXXXXXQERXTFQETGGNWLRWLMGKGKNEAHLPDDKN
KSIVWDEQKQRWVNLDEPEEESKPPPPPPTGFPKVPQAVPAGPGGPAGAPVNMFSRRAAG
SRARYVDVLNPGGTKSSGAVPAPSDLFAPLAPMPIPANVFVPNSVPGEAQPMEGSGAPEH
TPAANQTNKTRGGLERMYLNSAVLPPGSGLPVSNPDGSQSGELSRSSSMSSLSREVSQHF
NQAAAAPPSGGPAAGTVPFYNPSQFAQSPAVTGSSRLGRIGQRKYPTLK
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagcctgttccagcgggagccgcggctccacctcctgcaggcatc
gcccggaacatgtattggagaaacagctcgctcggtaaacgaggaaatgcaccagctgcc
ccagtgcagcctgtgacagacccttttgcttttggcagacaaactccacagggttcccct
ttagataatccatccaagggcaatgcgttggttatgcaaggctcttccccggcagggttt
ccgcagccagctgttttgcatgcttcaccgtcgcatgcaggggacaatcctcatggaccg
catacatctttatcagctcctgtatctcaaccaggaataaacaccagttcattttctaat
gttccaattccttcactgtccccaggatatgttataaatagtactgcagaggtgcatcca
aatgcagatcttggactccatggggctgcagtaccattgcattataatacaggagcagca
gttgaaaattctcttggtgtgcatcctggaatggtgtctgcgtcaaacaaacctggagtc
agacaagatgttagtagagatccaagtgatgttccttcaggacccaatgccacagcactc
ttccctccacctcctcagcagcctgtgtctcagtggaggcctgttccgggtaacctgcag
tctccggttcgaaattttgtgccccatcctgagctgtcttctcaaactgatgttcagaac
atttctcagtcttctgttagcacttctcatccacctccacagacaaatttacagcaggct
cctataaaccaaggtattccacaaaatatcatgcaagcgcctttatctgttggttgtgaa
aagaatgggaaaaatggctctgcaaatagtcaccccatgaacagcatccagcctggaaat
gtgtttaggcataacgcagaaatgactaacgcttggttaaatcaaccataccaggaacag
ttttatccacagccaccactgcaagactccggttttgtcattcccgcagctcaggaatct
aaccctaaaaaccagtctccagatatgtctggaaagtcaaatagacctattcccgcagat
cgagattcaggaactctctccatgtttttcaaaggggatgaggcagaaaatgaagaaata
ctttcatctgaaaaaaattacgtagttgagaaaacagagtttgatgcttgtcagacaaat
tcgccgtctttgtatcacccaccaatgcatcctcagcgggttgcaactaatgttctctct
caggcgcagactggtacaggttcagccaatgagatggtacaaagaggaatggatgcccag
tactttccnnnnnnnnnnnnnnctaagcactctgtgtttgctggtgatgacaagacacgt
ataggtgacacgtctgggcatggtgggtcacagtatgaaaacgttgagaacctggagtgc
attcagaatcaagaagtgctgccgagcgaaccccacaacatcagtgctgcccccccggct
gcgggccctgatctctacagatacgggtcctttccaggtcacgcacttcccaagaatgct
gttgtgagccatgctgaaggaggaccaaatttggaggcacctgattcattacctcaccct
gtccgaccagacagcgtatcttcaaactacagcaacatcagtcataggagcgcttctagc
tccgcaaggcctcaagagcaagtcggtnnaaaaaatgatgaagaatcttctgccatcttt
ttcaaacagattgactcctctcctttgggaggtgattcaagtgagctaaacctgagcaag
aactaccatggtaatctatcccagcctccaactccgagtcctcctaagcctacaggagta
tttcatacaagtgcaaatagttcttttgaacctgtgaggtcccatggagttggtatcaaa
cctgcagagattgaccaagcaaagatggtggttgaattaagagagaaccactcaaaccaa
aagagtatcaagaagaatacagctgtgccggtcgcatccccaggcaatcttgaacagcca
ccagataatctggaaactattttcatgcctcaggtacacccactgccccttgcagtcact
ggggaagctggaaatatgttgcactctggacctactatggaaaacttgcaatcagtatct
gagagaaggtcctcaacaagagctcagggggcagttaagaagtgtgatagcccagcgaca
actttgtgggctcataatgagttacccaattttgggggaaatgttcttctggctcctgct
gctcctgcagtgtacgtacctgccaaacaaactgtggaagtcattcaaccaccagaagaa
ctcccgtcaaatcagcagccaagtaaaccagggactattcctgtgcagctttcccaagat
ggaaatatatcctctgaaaatcttgagaatcctcccaaaatgggagaagaggaggcactt
cagtctcaggcaagttccggttatgcaagtttgttgtcttctccacctacagagtctttg
caaaatcagcctatcctgattgctcagcctaatcaaagctataacttggctcagccaatt
aatttttctatttctctatctaatcagctcagcagcaatgaaaacaatcagccaatgaag
gactctggggttggggacaagcctgcaatgggtccccaaacatcacatgctggcgggata
atttctggggaaaacatgccattacctgcgatgcaagttggatctctattagttaatgca
cttccaaatactagtctattgaaacataatttattacaaagccctgttaattcctctgat
actgcttctaatcagcctgcaaacttgcttatgaaaactccgcctaatttggctccagaa
gggcaaaagaatgttaatatggaaggttttgttcctgaatttgctagcaagccagggtct
aactcatctgtttctcctgggacttatctccccagtggaagtgcaaatgcactagtgtcc
cctgttaactctatagtacaggctaataattctgcaaatcattcaaatagcaaagaagca
gctgctggagtgctcgacttcacagtatcacggacgttggagaaaagcagtgcaagtaat
tctgtacaggtgcataatcagtcactttctggtggtccagtatatcctcaacagtcagct
ggtggtgctggtcaggtgggtcctgagatgcatgacaaccaacatttctatcaacaggtg
acaaaagatgtgcaggctgtatcagacagagctgtacagggagtgttaccatctccacca
caaatgcaagcagctcagatgcagcagccaccatcttctgggccatcctcagttcctttg
aactaccagagtgccacagggactaaagtcccgcaggtgtcgcagcagcaagagaaccag
gtgctcaataaccatccgcaacctgcgggttcccaagaagcgagttcagcgcagccaaca
aggtacgatcaaacgagtcctgataagcagccggcgtctgggcagccgtcgggtgctcca
ccctccacaaccccgtctaccaccagccagtcggtcacgccaagtgcacagcaagacctg
cagcgtccgtccctgccgcagacccctcaggaggcctttggtccaccccagaacccttac
tactactacagacatccttacgatgcttaccagcctccgtatccgccgccttatcctcct
gcagaccccagaacggcagctcatctttattacatggatgacagctacgggcagtacgac
ccgcggtaccgacactatgagagcggcacagcgtacgtggagcctgggagctaccgctat
gctgagcctgaacgtcccagttccagagccagtcactgctccgaccggccttcctctagg
caagggtatactgaagattattatccaaaaagtggatggagtgactattatccaggttat
tacccaaactcgtatgattatggagatccaagtcgctgggaccactacccatcagtgtac
gaccccagatacagagaccctagaggttatgaccagaggtattggtatgatgctgaacat
aacccttaccagaagagagatggatatccatacagcagcagatatgaccgatatgaagat
aactggagatacgatcctcgctttgctggaagttttgatgatgaatcggaacctcataga
gatccttacggtgatgacttcgataggcgcagtgtccacagtgagcattctgggcacagt
ctccggagctcccgcagcattcacagtcaccagagcagtttcagctctcgctctcagcaa
agccagctgtatagaagtaaccacgatctaacggctaatgcctatgaaactactgcgcag
gcagtgtcgctccacacagattatccgtatggcggataccctgctaactttgacggacaa
cagccttttacagattacggctacgcggctgaaccgggatggccagcagtagaacaagca
cctttaaggccctcaacgcctgagaaattttcagtgcctcatatctgtgccaggtttggc
cctgggggcttcctaataaaagtgctgccaaacctgccttcggaaggacagcccgctcta
gtggaaatacacagcatggagactatgttacaacattctccagagcaagaagagatgaga
gcgtttcctggtcctcttgctaaggacgacacccataaagtggatgtgattaattttgca
caaaataaagccacgcagtgctttaaaaatgaacatttaattgacaaagaatctgcaagt
ctgctttgggacttcattgtactgttgtgcaggcagaatgggactgttgtgggaacagac
ctggctgaacttttgcttcgagatcataaaacagtgtggcttcctgggaagtcccctaat
gaggcaaatttgatcgatttcactaatgaggctttggaacaagtggaagaagaatctggt
gaagcccagctctcgtttctcactgatagtctcataactaccattgacagtcttgagaaa
gagacagagagattcagagagctactgctttatggccgcaagaaggatgctttggagtct
gccatgaagcatggtttgtggggtcatgctctgctacttgccagcaaaatggacagcaga
acacacgcgagagttatgaccagatttgccaacagtctcccaattaacgaccctctgcag
actgtgtaccagctcatgtcgggaaggatgccggccgcgtccacgtgctgtggagatgag
aaatggggagactggaggcctcatctagcaatggtgttatccaacttgaccaataacgtg
gacttggaatccaggaccattgctaccatgggagacactcttgcttccaaaggcctgctg
gatgctgctcatttttgttaccttatggcccaagttggttttggagtttacacaaggaag
acaacaaagctcgtcctaattggatcaaatcatagcttgccattttttaagtttgccacc
aatgaagccattcaaagaacagaagcctatgaatatgcgcagtcgctgggaactcagcct
ggctgcttgcccaatttccaggttttcaaattcatctatgcttgccgactggctgagatg
ggacttgctgctcaggctttccattattgtgaagtgatttccagaactgtccttaaagat
ccacattactactcacctgtgcttattggccaactaatccagatgtcatcacaactacgg
ctgtttgacccacagataaaagaaaagccagagcaggaatcttctatagaaccttcatgg
ttagtaaggcttcgacatgtggatgggcagatcaaggagggtgcaatagcttataacaca
gacagatccaccccgccaccatacgcctgtagtactccgagctctgaattagaccgtgcc
agtcagtgcgatggagcaggagttggccgggacgtgggtccaggtgctgaaaatcccctg
tttgcatccttgttacccaacatggctcaacagatgcagagtgtgcagctgatgccttca
gtacctcaggctgtccttgatgggtcagctgcgatgattcctcctggtgaccaggaacct
gtccaaagtgtccctttctattcagtggcttctcagtcaggacctggctttgcacctcca
ggattttcaaatccgtacggaattgaaccgtcaccagtgtatttagggtcagcgctacca
ccaggagggccgccgcaagaagttgaaccacggacagaagagcagacaaacctggaaaca
ggaatgcagagaattgccccggactcanaaaaaaaaaagagagaggaggatttctatggc
agaatggccagcatggcaccaggacgaagatccagatccgcatctcagtcttcagcacat
atgggctacggacggagatcccgaacaacgtcagagtcctctgctcattctgtgggacga
gagagatccagctctgtcgcaaaccagccctctcctcctccctctgctcctgcannnnnn
nnnnnnnnnnnnnnnnnnnnnnaccaagaaaggtaaactttccaagaaactggtggaaac
tggcttcgctggctgatgggaaaaggcaagaatgaagctcaccttccggatgacaagaac
aaatcaattgtttgggatgaacagaaacaacgctgggttaacctggatgaaccagaagaa
gagagtaaacctcccccgccacctccaacaggatttcctaaagttcctcaggctgttcca
gctggacctggaggcccagccggcgcccctgtcaacatgttctccagaagagcagccgga
agcagagcccgttatgttgatgtcctgaacccaggtggaaccaagtcaagtggtgctgtt
cctgcgccatcagacctctttgcccccttggcgccaatgccgattcctgcaaatgtgttt
gttccaaactcagttccgggagaagcacagccaatggaaggcagtggagcgccagaacac
acaccagctgcaaatcagaccaacaaaaccagaggtgggttggaaagaatgtatttaaac
tctgcagtccttcctcctgggtctggacttcccgtctcgaaccctgatggctcccagtca
ggcgagctttcgcgctctagttcaatgagttcattatcacgtgaagtaagccagcatttt
aatcaggctgccgccgcaccgccctcggggggacctgcagcaggaacggtaccgttctac
aacccctctcaatttgcacaatctcctgcagtcactggaagttcaaggctgggaagaatt
ggccagaggaagtatccgaccttgaagtag
DBGET
integrated database retrieval system
