Columba livia (rock pigeon): 102084479
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Entry
102084479 CDS
T02912
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102084479 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clv03041
]
102084479 (DDX5)
03009 Ribosome biogenesis [BR:
clv03009
]
102084479 (DDX5)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102084479 (DDX5)
Spliceosome [BR:
clv03041
]
Complex A
U1 snRNP components
U1 related factors
102084479 (DDX5)
Complex B
102084479 (DDX5)
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
Pre-60S particles
Helicases
102084479 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
102084479
NCBI-ProteinID:
XP_005508068
UniProt:
R7VWE6
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MIFRFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRTVQ
EVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSG
LDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYS
RACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEAD
RMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANH
NILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGI
HGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR
TARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRY
SAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQA
SFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatctttaggtttggagccccccgttttggaggaagcagaggtggacctctctctggg
aagaaatttggaaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctg
cccaaatttgagaagaacttctatcaagaacatcccgatgtagctagacgtactgtgcaa
gaagttgaacagtaccgagcaagcaaagaagttacagttagaggccataactgtccaaaa
ccaattataaacttctatgaagctaactttcctgcaaatgttatggaagtaattcagagg
cagaacttcactgaaccaactgctattcaggcacaaggttggcctgttgcattgagtgga
ctggatatggttggagtggcacagactggatcagggaaaacactgtcttacttgttgcct
gctattgtgcatataaatcatcagccattcctggagcgaggagatggacctatttgtctt
gtgctggcaccaactcgtgaactggctcaacaagtgcagcaggtagctgcggaatatagc
agagcatgccgtttgaagtctacctgtatttatggaggtgctccaaagggaccacaaatt
cgtgacttagaaagaggtgtggaaatttgcattgcaacacctggaagacttatagacttc
ttagaagctggaaagaccaatctcaggcggtgtacttaccttgtccttgacgaagctgac
aggatgcttgacatgggatttgaacctcagatcagaaaaattgtggatcagataagaccc
gacaggcagactctgatgtggagtgccacatggccaaaggaagtgaggcaactggctgaa
gactttctgaaagaatatgtgcacatcaacattggtgcgctggaactaagtgcaaaccac
aacattcttcagattgtggatgtgtgtcatgatgtggagaaagatgacaagcttatccgt
ttgatggaggaaataatgagcgagaaggaaaataaaacaattgtttttgtggaaaccaaa
agacggtgtgatgatcttaccaggaaaatgaggagagatgggtggccagcaatgggcatt
catggtgataaaagtcagcaggagagggactgggttctaaacgaattcaaacatggaaaa
gcaccgatcctgattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaa
tttgtcatcaattatgactaccctaactcctcagaggactatatccaccgaattggacga
actgcccgcagtaccaaaacaggcacagcatacacattctttactcctaacaatattaag
caagtaaatgacctcatctctgtgcttcgtgaggctaatcaagccatcaaccccaaattg
cttcagttgattgaagacagaggttcaggtcgttcccgaggtgaccgacgtgacagatac
tctgcgggcaaaaggggtggatttagtagttttagagagagggagaactttgagagaacc
tatggtgcgctaggcaagagagactttggagcaaaaactcaaaacggggcctacagtgcc
caaagtttcagtaacggaactccttttggcaatggctttgcagctgcaggcatgcaggcc
agcttcagggccggcaaccccgcaggagcttaccagaatggctatgaccagcagtacggc
agtaacatcgcaaacatgcacaatggcatgaaccagcagcagtacgcgtatcccgccact
ggtgctgctcctatgataggttacccaatgccaacaagttactctcaataa
DBGET
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