Columba livia (rock pigeon): 102084498
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Entry
102084498 CDS
T02912
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv00260
Glycine, serine and threonine metabolism
clv00630
Glyoxylate and dicarboxylate metabolism
clv00670
One carbon pool by folate
clv01100
Metabolic pathways
clv01200
Carbon metabolism
clv01230
Biosynthesis of amino acids
clv01240
Biosynthesis of cofactors
clv04981
Folate transport and metabolism
Module
clv_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102084498 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102084498 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102084498 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102084498 (SHMT2)
Enzymes [BR:
clv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102084498 (SHMT2)
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Ortholog
Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
102084498
NCBI-ProteinID:
XP_005514191
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All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MQWVNGGYITRDTHRHRGGGWVPSRIDPPLCHLGGNTSSWRHNTGVSLLALGPAATGALW
VPSAPCPAQALQRCGGRMATVGRRAQHGTAATGHTPSWTGQESLAESDPEMWTLVQKEKD
RQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRALE
AFDLDPACWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRISA
TSIFFESMPYKLNPATGLIDYDQLEVTARLFRPRLIIAGASAYARLIDYARMKKVCEEVK
AYLLADMAHVSGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKTGK
ETLYDLEDRINFAVFPSLQGGPHNHAIAAVAVALKQANSPAFRQYCQQVLKNAKAMAQAL
LQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLR
LGAPALTSRHFYEEDFHKVVAFIDEGIMLALDVKSKTRKLQEFKTFLLQDAETQQRLAEL
RQRVETFARAFPMPGFSDH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggtcaacggcggttacatcacccgggacacacaccggcaccggggtgggggg
tgggtcccatctcggattgatccccccttgtgtcacctgggaggtaacaccagcagctgg
agacacaacaccggggtctcgctcctggcactgggacctgccgctacaggggcgctttgg
gtcccgtcagccccttgtcccgcacaggcgctgcagcgatgtggtggccgcatggccacc
gtgggccggcgggcacagcacggcaccgccgccaccggccacacacccagctggacgggg
caggagagtctggccgagagcgaccccgagatgtggacgctggtgcagaaggagaaggat
cggcagtgccgggggctggagctcatcgcttcggagaatttctgcagccgggcagcactg
gaagctctgggttcctgccttaacaataagtactcggaggggtaccctggcaagaggtac
tacgggggagccgaggtggtggaccagatcgagctgctgtgcgagcagcgggcgctggag
gcgttcgacctggatcctgcctgctggggcgtcaacgttcagccctactcgggatctccg
gccaacttcgcagcctacacagccctgctgcagccccacgaccgcctgatggggctggac
ctgcccgatgggggacacctcacgcacgggtacatgtcggacgtcaagagaatctcagca
acatccatcttctttgagtcgatgccctacaaacttaatccagccacggggctgattgac
tatgaccagctggaggtgacagcgcggcttttccgtccccgtctcatcattgccggcgcc
tccgcgtacgcccgcctcatcgactacgctcgcatgaagaaggtgtgtgaggaggtgaag
gcgtacctactggcggacatggcgcacgtcagcgggctggtggcggccaaggccatccct
tcgcccttcgagcacgcggacgtggtcaccagcaccacgcacaagaccctgcgtggcgcc
aggtcgggactgatcttctaccgcaagggcgtgcgctcggtggataagaagacgggcaag
gagacgctgtacgacctggaggacagaatcaactttgctgttttcccctccctgcaaggg
gggccccacaaccacgccattgctgctgtggccgtggctctcaaacaggccaactcgcca
gctttccgccagtactgccaacaggtgctgaagaatgccaaagccatggcgcaggcgctg
ctgcagcgcggctacaccctggtgtcaggtggcactgacaaccacctggtgctagtggac
ctgcggcccaagggcattgacggcgcacgggctgagcgggtgctggagctcgtctccatc
actgccaacaagaacacgtgcccgggggacaagagcgcactcaccccaggggggctgcgc
ctgggagcccccgcgctgacctcccgccacttctacgaggaggatttccacaaagtcgtg
gctttcatcgacgagggcatcatgctggccctggacgtcaagagcaaaaccaggaagctc
caggagttcaagacgttcttgctgcaggacgcggagacgcagcagcgcttggctgagctg
cgccagcgcgtggagaccttcgcccgtgccttccccatgcccggcttcagcgaccactga
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