Columba livia (rock pigeon): 102084676
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Entry
102084676 CDS
T02912
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X2
KO
K14327
regulator of nonsense transcripts 2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03013
Nucleocytoplasmic transport
clv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102084676 (UPF2)
03015 mRNA surveillance pathway
102084676 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102084676 (UPF2)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102084676 (UPF2)
mRNA cycle factors
P-body specific factors
102084676 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
102084676
NCBI-ProteinID:
XP_005510350
UniProt:
A0A2I0MHB6
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MPAERKKPANMEEKESSLNNKEKEFSERRPVSTREKPKDDVKVGIKRESLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKDEEEKKKLEEEEKKKQEEEEKKKQEEEAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPLLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRRVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSNKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAVRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLAGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatcttctttaaataac
aaagagaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccaaaagatgat
gtcaaggttggcattaagagagagagtttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaagaagacaaggagcggaagaaaaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagacgaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaggaagaagctgctcagttg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgccctgaggaaaacttcttc
agcagactagattccagtctgaagaagaacacggcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccacgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgttatgctgattttgctcctttattactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttgagaactgatttgcgtttcattgcagaattgacaatagttggaattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagacgacattgctggt
ttggtaccaaggagagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgaattcttcactccaaaggagagctgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcgtatcagaagctgttggcaaattctcagtctctagctgatcttttggat
gaaaatatgcctgaccttccccaagagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagac
gaagatgctagaaacttctatgagaatctcatcgacttaaaggcttttgtaccagcaatt
ttgtttaaagacaatgagaaatgttcccagaacaaggattccaacaaagatgaatcaaga
gattccaaagatgccaaagataacaaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatccactggagttagactgtggagatgaggcagaa
gatcttaccaaaaagcttcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttgaaacttatagtagatgcttttcttcagcagcttccaaactgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagctaacaga
aggaaactagtacgagcacttttcatagttcctagacaaaggttggatttactaccattt
tatgcaaggctggttgccacgttgcatccttgtatgtctgatgtagcagaggatctttgc
tctatgctgaaaggcgacttcagatttcatgtaagaaaaaaggaccagatcaacattgaa
acgaagaataaaactgtgaggtttattggtgagcttaccaagtttaagatgttctccaaa
aatgatactctccactgtttaaagatgcttctgtcggacttttcccatcaccacattgaa
atggcgtgtacgctgctggaaacctgtggaagattcctctttagatcacccgaatctcac
ttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatctagac
gctcgctatgttacaatggtagaaaatgcctattactactgtaatcctcctccagctgaa
aaaactgtgaagaaaaaacgccctcctttgcaggaatatattcgtaagcttctttacaag
gatctctccaaggttaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcagaagtgaaagactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagatgtt
ggaattcatgttgtggatggagtgctggaggatattcgactagggatggaggttaaccaa
ccaaagtttaaccagcggcggatcagcagtgccaagtttttgggggaactttacaattac
cggatggtggaatcagctgtaatatttcgaactctctattctttcacatcatttggtgtg
aaccccgatggcagccctagtccactggatcctccagagcatcttttcagaatcagacta
gtctgtacaatcctcgatacctgcgggcaatattttgacagaggatccagcaaacgaaaa
cttgattgcttccttgtatattttcagcggtatgtttggtggaaaaaaagcctggatgtt
tggacaaaagaccacccgtttcctatagacatagactatatgattagtgatacactggaa
ctgctgaggccaaagataaagctctgcaattctctggaagaagctgtcagacaggtgcaa
gacttggaacgggaattcttaataaaattaggaatcgtgaatgacaaggattccaaagat
tccattacagaaggagagaatctggaagaggatgaagaggaagaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctcg
gacaatgaagaagaagaaggtgaagaagaggaggaagaaaacacagattatcttacagac
tccaataaggaaaatgaaactgatgaggagaataccgaagtaatgattaaaggaggagga
cttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatgatg
ctggaaaatcttcagcaacggagtggtgaatctgtgaaagtccatcagctggatgttgcc
attcctctgcatctcaaaagtcagctcaagaagggtcccccacttgcaggtggggaagga
gagtcagagtctggagacacgatgccatttgtcatgttaacacgaaaaggcaacaaacag
cagtttaagatcctaaatgtaccaatgtcttcccaacttgctgcaaaccattggaaccaa
cagcaagcagagcaagaggagagaatgaggatgaaaaagctcactttggatatcaatgaa
cggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtccagctcca
gccaacacaaatcgcgaacggcggcctcgttaccagcatccaaagggagcacctaatgca
gatctaatctttaaaactggtgggaggtag
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