Columba livia (rock pigeon): 102085020
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Entry
102085020 CDS
T02912
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102085020 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clv03041
]
102085020 (DHX15)
03009 Ribosome biogenesis [BR:
clv03009
]
102085020 (DHX15)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102085020 (DHX15)
Spliceosome [BR:
clv03041
]
Complex A
U2 snRNP components
U2 related factors
102085020 (DHX15)
Complex B
102085020 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102085020 (DHX15)
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
90S particles
Helicases
102085020 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
102085020
NCBI-ProteinID:
XP_005501342
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQ
IPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA
KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI
VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE
GDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ
NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR
AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD
PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS
ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI
NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH
YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS
NFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgattccacacagtattaaccctttcacaaatctaccgcatacaccacgatattatgac
atcctgaaaaaaaggctacagcttcctgtctgggaatataaagaaagatttacagatatt
ttgatcaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacag
atccctcaatggtgtgttgattacatgcgctcgttacctggaccaaagaggggagtagca
tgtacccagcctaggagagtagctgcaatgagtgtggcacagagggttgctgatgagatg
gatgtcatgctgggccaggaggttggttactctattcgatttgaagactgcagtagcgca
aaaacaattttgaagtatatgactgatggtatgttgcttcgtgaagcaatgaatgatcct
ttgctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctact
gatattttgatgggagttctgaaggaggttgtaagacaaagatctgatttgaaggttata
gtaatgagtgctactttagatgccggcaagtttcagatctattttgataactgtcctctt
ctaactatcccgggtcgcacccatcctgtggagatattctatacaccagaaccagaaagg
gactaccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaggaggaa
ggagatctcctactctttcttactgggcaagaggagattgatgaagcctgcaagaggata
aaacgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattgtat
tccacccttcctccacagcaacagcaaaggatttttgaacctcccccaccaaaaaaacag
aatggagcaataggaagaaaggttgttgtgtccactaatattgctgaaacatctttaaca
atagatggtgttgtgtttgtgattgatcctggctttgcaaagcagaaggtatacaatcct
cgtatcagagtggagtctctcttggtgactgcgattagtaaagcttctgctcagcagcgg
gctggccgtgctggtcgtactagaccaggcaagtgcttcaggctttacacagagaaggct
tacaaaacggaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatct
gtagtattgcagctcaagaagcttggtatagatgatttggtacactttgattttatggat
cctccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgcttta
aatgatgatggagacttgactgagttgggatccatgatggctgaatttccgttggaccca
caactggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatct
atcactgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaat
gtctaccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggat
agatttaatttgcctcgtagaagcactgactttaccagccgagactattacataaacata
agaaaggcattagttaccgggtatttcatgcaggtggcacatttggaacgaacagggcat
tacttaacagtaaaagataaccaggtcgtgcagttgcatccctccactgttcttgatcat
aaaccagagtgggtgctctataatgagtttgtccttacaacaaagaattacatccggaca
tgtacagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagc
aattttccacagtgtgaagcgaagaggcagttggatcgcatcattgccaaacttcagtcc
aaggaatactcgcagtactga
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