Columba livia (rock pigeon): 102085287
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Entry
102085287 CDS
T02912
Symbol
ARHGEF12
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04270
Vascular smooth muscle contraction
clv04625
C-type lectin receptor signaling pathway
clv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102085287 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102085287 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102085287 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102085287 (ARHGEF12)
Membrane trafficking [BR:
clv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102085287 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102085287
NCBI-ProteinID:
XP_021152573
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
EGRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDLAAFGHMSPIMASPHSP
GTAGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQCLQEEYNRSATPRLLKEI
QETKKHIPQLQEQLSKATGCAQDGVLSARSVTESLQISEAEAESGDCVSKLDFGGDSPSR
PNSDIADSPRSGLKERIYPDESPEKPEVQDTDSQSSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVAVPDEISLELDRRRPELIPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQILAKIEEVLMTSQPLEEEKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSGAIGRAMEMQKPRHPKHSPTAASVSPEPPDSSKMRQSGSCGDGTDAPYPP
ANPMSPLAAGPFSSPEGNKDSDTGLKQTGEAPPANEYVDGTPRTPSNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDTDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
VLNDQMKAVRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSARRVI
PLPQSGPGDKEQHDIPTSNLQSPDKDLVLEPPLMLNAQSSSPIVSDKSKAESLLVSEGQF
DKVQQADLTLKDPSACCEHTGAGTAAVPEGQWALDALRNLGLLKQLLVQQLGFAEKGTPG
DRQRFPRFRTVSQEAQMESGSEFQNSADRTLPRAGIGESTATYALRTSAEAAAGDSVQLG
AREPGSSSSLAMDRMSVTLGLAAELEAVGADESGEHFFDAREAHSDENPSESELMERKEE
EDVQIRISGNYLILDGYGAVQESSTDEEVSALVLRCAAGGXADGGSSPFAEDMMGTGDES
CCFLARPHLSVESRMQMMQYIQKIEDDLEKLKEVEEDYTILRRQGLAGSASTGEHSDKS
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaagacac
ggcagcattttgagcagagagtctccagccgacaagaagcagaaggtcgaacgctgcagc
agcacccacgacttcgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagggtagatccgagacgtatggtctcgttcaacgctgcgtcgttatccagcgggatgaa
aacgggtttgggctgacggtcagtggggacaacccggtcttcgtgcagtccgtcaaagaa
gatggagcagccatgcgggctggagtacagacaggcgacagaattatcaaggtgaatgga
accctcgtaacgcactcaaaccatttggaggtggtcaagctgatcaagtcgggttcctat
gtagctctcactgtccaggggcgcccgccggggtcgccccagatcccgttggctgattcc
gaggtggatctggctgcgtttggccacatgtctcccatcatggcatctccccattcaccc
ggcacggcgggaaacgcggaacggatcacgagcccggtgcttatgggggaggagaataat
attgtccacaaccagaaggtggagatcctgcgcaagatgctgcagaaggagcaggagcgg
ctgcagtgtctgcaagaagagtataaccgatcagccaccccgcggctgctcaaagagata
caggaaaccaagaagcacattccgcagctgcaggagcagttgtccaaagccacaggctgt
gctcaggacggagtcttgtcggccaggtcggtgacggagtcgctgcagatcagcgaagcg
gaggcggagagcggggattgtgtgagcaaactggatttcggtggggacagcccctcccgg
cccaacagcgacatcgctgatagtcctcgcagtggtttgaaggagcggatttacccggat
gagagcccagaaaagcctgaggttcaagatactgactcccagtccagtgttgggagcccc
ctgtcccgagtggggactcagatcatcggggcagaggacgacgacttcgacactgaacag
gagcagattaacgggcagtgcagctgcttccagaacatcgagctcctgaagtctcgcccg
gctcacctggctgttctcctgcaccacgtggtgtcccagtttgaccctgcagcactgttg
tgttacctttacacagacttgtacaagcaaaccaactccaaagagactcggcgtgtcttc
ctggagttttaccagttcttcttggaccgagctgcaaatctaaaggttgcggttcccgat
gaaatctccttggagcttgacagaagacgacctgaactaattcctgaagagcttcatcgc
cagtttatacaaactatgcaagataaagtctgcccagaagtccaaaggaatctggaagat
ttcaggcagaagcgcagcatggggctgaccctggcggagggagaactcaccaagctggac
gcagaacgagttcgcgacaggaacgcggtggagaaggaacgagcatgtgcagaacagatt
ctcgctaaaattgaagaagtcttgatgacatctcagcctttggaagaagagaagagttcc
acgatgcagtatgtgattcttacgtacatgaaacacctgggagtcaaagttaaagagcct
cggaacctggagcagaaacgcggccgcatcggcttcctgccaaagatcaagcaaagcatc
aagaaagagaaagaaggagaggaaaaagggaagagaagaggctttcctaatatcttgggc
ccaccgaggaggccgagccgacatgacagtggtgcaattggcagagccatggagatgcag
aagccccgccacccaaagcactcgcccacagcggcctcggtgagcccggagccgccggat
tccagcaagatgcgccagagtgggtcgtgcggtgacggaactgacgccccgtacccacct
gccaaccccatgtcccccttggcagcgggtcctttttcctccccagaaggaaacaaggac
agcgacacgggtttgaagcagaccggagaagctccacctgccaacgagtacgtagacggc
acaccccgcacgccgagcaacaccttcgagttcccgtctcctttggaaaacttgcaggag
gaggagggagaatcagagagaatggttgacatgggaacaccgaagcctttccgcaagatg
gacagtgttggtttcgcagatgtgcaaagcgaagatgagctgtatgattttgacatggac
acggaccctcccaactggcagcaactcgtgagccgggaagtgctgatggggctgaaaccc
tacgaaatcaagcgccaagaagtgattaatgagctgttttacaccgagagagctcatgtc
cgcacgctgaaggttctgcacaacgtgttctaccagcgtgtcacccgggaaggcatcctg
agctccagcgacaagcggaaaatcttctccaacctggaggatatcctggggctccatgtt
gtgttgaacgatcagatgaaagccgtccgcaaaaggaacgagacttctgttattggccaa
atcggggaagacttgctttcctggtttagtggaccagcagaggaaaagctgaaacatgca
actgccactttctgcagtaaccagccctttgctctagaggtcatcaagtcgcgccagaag
aaggactctcgattccagacttttgtgcaggatgctgagagcaatccgctgtgtcgccgg
ctgcagctgaaggatataattccaacagagatgcagaggttgactaagtaccccctcctg
ctggataacattgccaagtacacagagctgcccgaagagaaagagaaggtgaagaaagcg
gcagatcattgtcgtcagatcctcaaccacgtgaaccaggcggtcaaagagtccgagaac
aagcagcatttggaagattatcagcgtcgtcttgacctgtcctacttgaagcagtctgag
gatcccatgatggacgagttcaggaacctggatctaaccaagagaaaaatgcttcacgaa
ggacctctgacgtggaaggttaatcgtgacaaaaccatcgatctctacactctgctgctg
gaggacattctggtgctgctgcagaaacaagatgataaactggtcctgaagtgtcacagt
aagatcttggcgtcgacagcagacagtaaacacaccttcagccctatcatcaaattgaac
accgttctggttcgccaggtggcaacagataacaaagctttcttcgtcatctccatgtca
gaaaacggcgctcacatttacgaactggtggcgcagaccgtttcagaaaagaacgtgtgg
caggaccttatagctcagatggcggggactgtaaaaatggggagcgccaggagggtgatt
ccattaccgcagtcaggacccggcgacaaggagcagcatgacattcccaccagtaacctg
caaagtccagacaaagatttggtccttgaacctcccttaatgctgaacgcgcagtcgtct
tcgcccattgtgtccgacaagtccaaggcagaaagtcttctcgtgtcagagggacagttt
gataaagtgcagcaagcagacctgacgcttaaagatccttctgcgtgctgcgagcacaca
ggcgccggaacagcggcggtgccggaagggcagtgggcgctggatgcgttaaggaacttg
ggcttgctgaagcagctgctggtccagcagctcggctttgctgagaagggcacccccgga
gaccggcagcgctttcccaggttccggactgtttctcaagaagcccagatggagagtgga
agcgaattccagaattccgcagacagaacgctccccagagccggaatcggcgaatccaca
gctacttacgcccttcggacttcagccgaagcagctgcgggggattccgtgcagctggga
gccagagagcccggctcgagcagcagcctggccatggaccgtatgagcgtgacgctgggg
ctggcggcggagctggaggccgtgggcgccgacgagagcggggagcatttctttgacgct
cgagaagctcacagcgatgaaaacccgtctgaaagcgaactcatggaaaggaaggaggaa
gaggatgtgcaaatacggatctcaggaaattatttgatcctcgacggctacggcgcggtg
caggagagctccaccgacgaggaggtgtcggcgctggtcctgcggtgcgcggcgggcggc
nncgcggacggggggagctccccgtttgccgaggacatgatgggcacgggggacgagtcc
tgctgcttcctagccagacctcacctctccgtagagtcgcggatgcagatgatgcagtat
attcagaagatagaggacgacctcgaaaagttaaaggaggtggaggaggactacaccatt
ctccgacgccaagggctggctggatcagcctccacgggagagcactcagacaaaagctag
DBGET
integrated database retrieval system
