Columba livia (rock pigeon): 102085297
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Entry
102085297 CDS
T02912
Name
(RefSeq) sodium channel protein type 5 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clv04040
]
102085297
Ion channels [BR:
clv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102085297
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102085297
NCBI-ProteinID:
XP_021156885
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MAEFLLPGTNNFHKFTHESLAAIKKRIAAKRNCRRNTVDQKPEEKPRPQLDLKAFQKLPA
LYGNPPPDLIGEPLEDIDPYYKDSKVFIVLNRQKTIFRFTATRALWILSPFHPIRRTAIK
ILVHSLFTYFIMCTITTNCVFMALTESAKSSSSPSWNKYVEFTFTGIYTFESLIKILARG
FCLNEFTFLRDPWNWLDFSVIVMAYVGAFSKLGSVSVLRTFRVLRALKTISVVPGLKIIV
GALIQSVKKLANVMILTVFCLSVFALIGLQLFKGNLRQKCISNSTEARKIYNKTYESYEM
FANDTVYFAKKEGTSDILLCGLGAGVCPPDYICLKIGPNPDYDFTSFDTFGWAFLSLFRL
MTQDYWERLYQQTLRASGKVYMLFFMLVIFLGSFYLVNLTLAVVTMAYEDQNKATIAETE
AKEKKFREAMELLQKEQESLALKGIDILSISSFGASSLSTKEMKERSNRKKRNKSLGIED
NEEEQQFPKSQSTDIQRKLSFLGLVYGPNTNQEKRRLSHGSVFNFQTPALEIDSRTDFGV
EETHSAGEHDIQRRSLSVTQMARRSSVQSQMSHGSRPGTPNCGQSSKRSNVDDCNGMISV
MGGGTSKVHSLDLVSSEGVMLPPVVEDPGKGDMQPAVNDESSMMHLPPRLSVEHFNEALQ
RQRAASAVSIITSVLEELEESQRRCPPCLKDFALKYLIWDCCPLWLRIKKKVAAFIKDPF
IDLTITVCIVVNTLFMALEHNNMSEEFKFMLKVGNLVFTGIFTAEMVLKIIALDPYYYFQ
QHWNIFDSVIVTLSLIELSLPRYKGKKGRQRGGTFTVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSLGALSNLTLVLAIIIFIFAIVGVQLFGRSYWENRHKITKNGKPRWHMMDFYHSF
LVIFRILCGEWIETMWDCMVVAGPPLCLLVFLMVMVIGNLVVLNLFIALLLNSFSTDSLQ
TAEDDGEMNNLRIAFARIHKGFHYVKSVMWDTCCGKLKHIKKAQRKKIKLTAQNSLRFKR
EEIQNCKENYNNEWAEKSADKCSNLEDFITNPNIFVCVPIAEAENTSEGFEDDDNLSTFT
DIECSKQDENHLRQRGERGKTSGSWSKGSGFSSEDFSVLYLGKDRKLEPSSSEQNEFDSV
SSSEGSTVDLTNPEDLLRQIPEFAEDFKTPEKCFPEACVRYFHCYVGSAKKFGGETWWNL
RKTCYQIVEHSWFESFIIFMILLSSGALAFEDIHINERKRIKMILVFLDKLFTFIFVLEM
LLKWVAYGFKKYFTNVWCWLDFFIVAASLINLLGSTFEAVKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNLTEEDSELDDSIND
IMDCKKSNTSGKIFWVNVKVNFDNVGSGYLALLQVATFKGWMDIMYAAVDSREKDEQPQM
EHNVFMYLYFVNFIIFGSFFTLNLFVGVIIDNFNQQKKKLGGEDIFMTEEQRKYYSAMKK
LGSKKPQKPIPRPLNRFQGFLFDIVTCQAFDIVIMVLICLNMVSMMVETYDQSLTKTEVL
NKINILFVTVFTAECVLKLVALRQYYFSNAWNIFDLVVVIMSLIALLLAGIGKAFEHFLP
PTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLIMFIYSIFGMAN
FAYVKMEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLNGTIGE
CGKPAIGIIYFVSYIIISFLIVVNMYIAVILENFNVATEESTEPLGEDDFDIFYEIWEKF
DPEATQFITFSALSDFADALAEPLRVPKPNKVELIAMDLPMVSGDRIHCLDILFAFTKRV
LGDSGEMDTLKVQMEEKFMAANPSKNSYEPISTTLRHRQEEASATVIQRAYRSHLLLRCV
KQASYLHHRRTCSIDTLRDAAPEKEGLIASMMGQKYGKSPDKSDTLSSVSVPPSYDSVTR
ASSGNLMVENEEITDNQQSSDVK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcttactacctggtaccaacaacttccataaatttactcatgaatctttg
gctgctatcaaaaagagaattgctgccaagagaaactgtcgaagaaatactgtagaccag
aaacctgaggagaaaccacgtcctcaacttgacctaaaagctttccagaagctaccagct
ctctatggaaatcctcctccagacctcattggggaaccgctggaggatattgacccatac
tacaaagatagtaaggttttcatagtgctaaacagacagaaaacaatcttcagatttact
gctacacgtgccttatggatcctcagtcctttccacccaatacgaagaacagcaatcaaa
attttagtacattcattattcacttattttattatgtgcactattacaactaattgtgta
ttcatggctctgactgagtccgctaagtcttcttcatctccttcatggaacaagtatgtt
gaatttactttcaccggcatttacacttttgaatcattgataaaaatattggcaagagga
ttctgtctaaatgaattcactttccttcgagatccgtggaactggctggatttcagtgtt
attgttatggcgtatgtgggagcatttagtaagttggggagtgtgtcagtccttcggact
ttcagggttctgagagctttaaaaaccatttcagtagtcccaggacttaagatcattgta
ggggcacttatccagtctgttaagaaacttgccaatgtgatgatcctgaccgttttctgc
ctgagtgtctttgccctcataggcctccagctttttaagggtaatctaagacaaaagtgc
atcagcaactctacagaggccagaaaaatttataacaaaacctatgaatcctatgaaatg
tttgcaaatgacacagtatactttgctaagaaagagggcacctcagatattttgctatgt
ggtcttggtgctggggtctgtcctccagattatatatgcttgaaaatcggaccaaatcct
gattacgatttcactagttttgatacgtttggctgggcttttctttccttattccgcctg
atgacccaggactactgggagcgtctataccagcagaccctccgagcttctgggaaggtg
tatatgctcttcttcatgctggtgatctttctgggctcattttatctagtcaacttgact
ctggctgtagtgacaatggcatacgaagaccagaacaaggccaccattgctgaaacagag
gcaaaggaaaagaaatttcgggaagccatggaattactacagaaggagcaggagtcttta
gcacttaaaggaattgatatcctgtcaattagctcctttggagcctcttctctgtctacc
aaagaaatgaaagagagaagcaataggaaaaagagaaacaagtccttggggatagaagat
aatgaagaagaacaacagttccccaagtcacagtccacagacattcaacgaaagttgtct
ttccttggcctggtgtacggtcccaacacaaatcaggagaagcgcaggcttagccacggg
agcgtgtttaatttccaaacacctgctttagaaattgattccaggacagattttggtgtt
gaggagacccacagtgctggggaacacgacatccagcgtcggtcgctgtcggtcacgcag
atggcaagacgctccagtgtccaaagccaaatgagccacggctctcgccctggtacccca
aactgtgggcaaagcagcaagaggagtaacgtggacgactgcaatgggatgatctcggtg
atgggaggaggaaccagcaaggtgcacagtctggatctggtgtcttcagaaggagtaatg
cttcccccagtagtggaagacccaggaaagggtgatatgcagccagctgtaaatgatgag
agcagcatgatgcacttgcctcctcgtctgtcagtggagcactttaatgaggcacttcag
agacaaagggcagcaagtgcagtcagtataattaccagtgtcttggaggaacttgaagaa
tcccagcggagatgcccaccatgcctgaaagattttgctttgaagtatctaatttgggac
tgttgtccactttggttgagaatcaagaaaaaagtggccgctttcataaaggatcctttt
attgatctcaccatcacagtttgcattgtggtgaatactttgttcatggcacttgagcac
aacaatatgtcagaagagtttaaatttatgcttaaagtaggcaacttggtttttacagga
atcttcactgcagaaatggtcttaaaaatcattgctctagatccttattattattttcag
cagcactggaatatttttgacagtgtaattgtcaccctgagtttaattgaactaagttta
cccagatacaaaggcaagaaaggaaggcaaagaggaggaaccttcacggttttacgatcc
ttcagactgctgagggttttcaagctggcgaagtcctggccaactttaaacaccctaatt
aaaataattggtaactctctgggagcattaagtaatctgaccctcgtcctggcaatcatc
attttcattttcgctatagtaggggtgcaactttttgggagaagctattgggagaaccgc
cataaaataaccaaaaatggcaagccacgctggcacatgatggacttttaccactcattc
cttgtcattttccgaattctgtgtggagaatggattgaaaccatgtgggactgcatggtt
gtcgctggaccaccactgtgccttcttgtctttctgatggtcatggtgataggaaattta
gtggttctcaaccttttcattgcactgctgctgaattccttcagtacagactctctccag
acagcagaggatgacggagagatgaacaatcttcggattgcctttgctcggattcacaag
gggtttcactatgtgaagagcgttatgtgggatacctgttgtggaaagctcaagcatata
aagaaagcacagaggaagaaaatcaagttgactgcgcagaactcacttaggttcaagcgt
gaagaaatacaaaattgtaaagagaattacaataatgagtgggctgagaaaagtgcggac
aaatgctcaaatcttgaagattttattaccaatcccaatatatttgtttgtgtccctatt
gctgaagcagagaatacaagtgagggttttgaagatgatgataatctgagcacatttaca
gacatagaatgcagcaaacaggatgaaaatcacctgaggcaaaggggagaaagagggaaa
acttcaggaagctggagcaaaggatcaggattttcctctgaagatttcagtgtgctttac
cttggaaaggataggaagcttgaaccgtcatcatcagagcaaaatgaatttgacagtgtc
agctcttctgaaggcagcaccgtggatctgacaaaccctgaagatcttttgaggcagatt
ccagagtttgctgaagacttcaagactccagaaaaatgttttccagaagcttgtgttcga
tattttcattgttatgtgggaagtgccaaaaagtttggaggagaaacatggtggaatctg
agaaaaacctgctaccagattgtcgaacactcctggtttgaatcctttattatattcatg
attcttctgagcagtggagccctggcatttgaagacatccatataaatgagagaaaaaga
attaaaatgatattggtgtttcttgacaaactgttcactttcatctttgttctggagatg
ctcctgaaatgggtggcttatggcttcaaaaagtatttcaccaatgtctggtgctggctg
gatttctttattgtggctgcctctttaataaacctcttaggcagtacatttgaggccgtg
aaatctcttaggactctccgagctctgagacccttaagagcattgtcacgatttgagggg
atgagggtggttgtcaatgccctcgtgggagccatcccttccatcatgaatgttctgctt
gtctgccttatcttctggctcatcttcagcatcatgggagtgaacctctttgctgggaag
tttgggaaatgtgtcaacctgacagaagaagattcagaattagatgattcaatcaatgac
ataatggactgtaaaaagtctaatacctcaggaaaaatattctgggtcaatgttaaagtc
aactttgataatgttggctctggctacctggctcttcttcaggtggcaacttttaaagga
tggatggacatcatgtatgcagcagtagattcacgagagaaagatgagcagccgcaaatg
gaacacaatgtgtttatgtatctctacttcgtgaacttcatcatcttcggatctttcttt
accctaaatctctttgttggtgttattattgacaatttcaatcaacaaaagaaaaagtta
ggtggggaagatatctttatgacagaagaacagagaaaatactacagcgcaatgaaaaag
ttgggatccaaaaaacctcaaaaacccattccaagaccactgaacagattccaagggttc
ctttttgacattgtaacatgccaagcctttgatattgtcatcatggttctcatctgcctt
aacatggtctccatgatggtagaaacctatgaccaaagtctcacaaagactgaagtcctt
aacaaaatcaatatactcttcgttactgtttttactgcggaatgtgtactgaaattggtg
gctctgcggcagtactacttctcaaatgcctggaacatattcgacttagttgttgtgatc
atgtcacttattgccttactgcttgctggcattggtaaagcatttgaacatttcctacca
cctacactcttcagggtcattcgcttggctcggattggacgaatactgagactcatccgg
gctgccaaaggaattcgaactctgctttttgcattaatgatgtccctacctgctctattt
aatattggcctcttgctttttctgatcatgttcatttattctatttttggcatggctaac
tttgcctacgtgaagatggaagctggcattgacgatatgttcaacttccagacctttgct
aacagcatgctctgtctcttccaaatcaccacgtcagctggctgggatggtcttctcagt
cctattttaaacactgggccaccatactgtgatccaaacctaaatggtactataggtgaa
tgtggtaaacctgccataggtattatttattttgtaagttatatcatcatatcatttctc
attgttgtaaatatgtacatagctgttattctggagaacttcaatgttgctactgaggaa
agtacagaacctttaggggaagatgactttgacatattttatgaaatctgggagaagttt
gatcctgaggcaactcagtttataactttctctgcactttcagactttgcagatgctctg
gctgaacctttacgggtaccaaagccaaacaaagttgaactcatagcaatggacctgcct
atggtcagtggagataggatccactgcctggatatcttgtttgcttttaccaaacgagtg
ttaggagattctggggagatggatactctgaaagtacaaatggaggagaagttcatggct
gccaatccatccaaaaattcctatgagccaatctctactacactcagacacagacaagag
gaagcttctgccactgtcatccagcgtgcctacaggagtcatttgctcctgcgctgtgta
aagcaggcttcttacctgcaccatcgcagaacttgcagtattgacactcttcgagatgct
gctccagaaaaggaaggacttattgcatctatgatgggtcaaaagtatggtaagagtcct
gacaagtctgacactttgtcctcagtatccgttcctccatcatatgacagtgtcacaaga
gccagtagtggcaatctcatggttgagaatgaagaaattacagataatcaacaatcttca
gatgttaaatag
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integrated database retrieval system
