Columba livia (rock pigeon): 102085365
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Entry
102085365 CDS
T02912
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X2
KO
K15184
AF4/FMR2 family member 1
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clv03021
]
102085365 (AFF1)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
102085365 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
ANKH
Motif
Other DBs
NCBI-GeneID:
102085365
NCBI-ProteinID:
XP_005498558
UniProt:
A0A2I0MGR1
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MNFAMAAQSSLYNEDRNLLRIREKERRNQEALQERDIFPEKTPLFAEPYKTNKEDELSSR
IQNMLGNYEEVKELISNRSHQNLIGIPKSVAPLIPQGKPDRPYFPEKTSRTLTSSFHRTT
RHPHMGPTVVAPPPPSHSMHYQKAQSRTEPASGLHAKSHSLSNGQSQGQEHNRGGQESHA
GFHHKRNDRRAVGEGHPNELQASFLALSPLLPSLSSPVAPLSPLHSSQHINSRSQNSSKS
HGPTHSQTKSSQDLVAGSQEKESRDSSAVNLTSTTQPSSQTFPPPLPSKTSAMQQKPTAY
VRPMDGQDQAPVESPELKHLPEEYHGEPYEKISDLKVNAKAKLSKLKIPSEPIEQNFPSD
VHSIEDILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKESQHVGSVAQNQKQYDAPSKTL
PSSQPRTSMLQDDLQLSDSEESGDDQVVEKPPSSFPPPSALQSQPKSVASAHSSSPESGS
TSDSDSSSDSETESSSSESEANDPPRAPAPEPDPPTSNKWQLDNWLTKVNQPAVPTESLN
EITHEDGFEEGKEQEQGVSSSSSHQHVEPRESHHKSSSRAARAPQGAHLPTKRSCQRSPV
RTEEPSPRQTVGIKRPGKAPAHEGPKGGLKVESDPGPFEVKDQSSRDKPKVKTKGKPKSS
DRKDLKPAPKEPTESRKHKNVHQANAKPCLDPKLVRDILLGSAQEHLALSPLPQEQGTTP
TRTSSHRPAIVARENFHKEKLPLPTKEKKLLSPVSDAPTPQSLMVKIDLPLLSRVPQPPG
KGIHEKRAEAKELPGARKQDLERKNMDAPDKSLQKRKREMEKETDRKKTKSEKETKSLQS
SANKDSSKSKALKASFETQKKDLLPPPLPPMSPAHPAPKSTKTAQKRPRSESDELPTMDN
TARNKSNHKDPLFSKHKKVERNHAELSKGIKGSAGDVTSPFSVPSLPNGTSKPRRPQLKL
EKQHPMEYYIEEAKRLKHKADAMTDKTGKAFQYLEAALFFIEYGIAMESDGPAPKSGYSI
FSDTIDLIKFIMTLISFTDASASSHEKIFAVLCMRCQSILHMAMFRYKKDTAIKYSRILN
DHFKSSSRVTQAPSPCVARSTGMPSPLSPMPSPASSASSQPGSNASNCSGNSIGSSLTIP
YTIPSITSSYVNITSYILYAYDIWEQADALARKNKEFFAELSTATCTLALNSSMTELVHY
VRQGLQWLRLETNTP
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccatggctgcccagtcgagcttgtacaatgaggacagaaacttgctgcgt
attcgagagaaagagaggcgtaatcaggaggctctgcaagagagagacatattccctgag
aagactcccctctttgcagaaccctacaagaccaataaagaagatgagttgtcaagccga
attcagaacatgctgggcaattatgaggaggtcaaggagcttatcagcaacagatcccat
cagaatctcatagggattccaaaaagtgttgctcctctgattccgcaaggaaagcctgat
cgcccatacttccctgaaaagaccagccgtacattaacatcttcattccaccgcacaact
cgacatccacacatgggacctacagttgtagctcctccccctccgagccactccatgcac
taccaaaaggcacagtccagaacagaaccagcttcaggtttgcacgccaagagtcacagc
ttatccaatggtcagagccaaggtcaagaacacaatcgtggtggccaagaaagtcacgca
ggctttcaccacaagagaaatgacaggcgtgcagttggtgaaggtcatcctaatgaactg
caggcctcctttctggcgctttctccattactgccatctttgtcttctccagtggccccc
ctgtcacctctacattccagccagcatatcaattccaggtcacagaacagcagcaaaagt
catgggccaacccacagtcaaacaaaatcatctcaggacctagtggcaggatcacaggag
aaggaaagtcgggacagctcagctgttaacctgaccagcaccactcagccttcctctcag
acttttcccccacctttgccatcaaaaaccagtgcaatgcagcagaaaccaactgcctat
gtcagaccaatggatggccaagatcaggcgccagttgaatcaccagagctcaaacatctg
ccagaggaataccacggagaaccctatgaaaagatctcggatttgaaggtgaacgccaaa
gccaaactatctaaactgaaaatcccttctgagcccatagagcaaaacttccccagtgat
gtccactccattgaagacattttgaaggaaatgacccactcgtggccacctcctctgaca
gctattcatacacccagtacagcagagccctccaaatttccattcccaacaaaggaatca
cagcatgttggatctgtagcacagaatcagaaacagtatgacgcaccttcaaaaacgttg
cctagttctcagccaagaacatcaatgctccaggacgacctgcagctcagtgatagtgaa
gagagtggtgacgaccaagttgttgaaaagccaccttcttcgtttcctcctccaagtgcc
ctacagtcccagcccaagagtgtggcatcagcacattccagcagcccagagtcagggagc
accagtgactcagacagctcttcagactcggagacagagagcagctcgagtgagagtgaa
gcaaacgaccctccgagagcaccagcgcctgagcccgacccaccaacttctaataagtgg
cagcttgacaactggctaaccaaggtgaaccaaccagcagtgccaacagagagcctcaat
gaaatcacccatgaggatggatttgaagagggcaaggagcaggaacagggtgtcagcagc
agttcctcccaccagcacgtcgagccgagggagtctcatcacaagagctccagccgagcg
gccagggctcctcagggtgctcatcttcccaccaaacgcagctgccagaggtctcctgtg
cgcactgaggagccctcacccaggcagactgtgggtatcaaaagacctggcaaggctcca
gcgcacgaggggcccaagggaggcctgaaggtggagagtgatcctggtccttttgaggtc
aaagaccagtcttccagagacaagccaaaagtcaaaacgaaagggaagccaaaatccagt
gacagaaaagacttgaagccagcgccgaaagaacccactgagagcagaaagcacaagaac
gtccatcaggccaatgccaaaccctgcttggacccaaagctcgtgagagacattttgctt
ggcagtgcccaggagcatctcgctctcagtccccttcctcaagaacagggcacaaccccc
actaggactagcagccacaggcctgccatcgtggccagagagaattttcacaaggaaaaa
cttcccttgcctacaaaggagaagaagttgctctctccagtgagcgatgcccccacccct
cagtccctcatggtgaaaatagatctccctctcctgtccagagtcccccagccccctggg
aaaggcattcatgagaagagagcagaggccaaggagctccctggtgcaaggaagcaggac
ttggagaggaaaaacatggacgctcctgacaaatcccttcaaaagaggaagagggaaatg
gagaaggaaactgataggaagaaaacgaaatcagaaaaagaaacaaaatcattgcagtct
tcagctaacaaagactccagtaaatcaaaagcactgaaagcttcatttgagacccagaag
aaagatctcctacccccgccactgccacccatgtctcctgcacatcctgcaccaaagtca
accaagactgctcaaaagagaccccgaagtgagagtgatgagctgcctaccatggataac
actgccaggaacaagagcaaccacaaggatcctttgttctccaagcacaaaaaagtggag
agaaatcacgctgaactgtcgaagggcatcaaaggatctgcaggggatgtcacaagtcct
ttttctgtgccttcattgccaaatggtacctccaagccaaggagacctcaactcaagtta
gaaaaacagcatccaatggaatactacatagaagaggccaagaggctgaagcacaaagct
gatgccatgaccgacaagactggaaaggcctttcagtacctagaagctgctcttttcttc
attgaatatggaattgccatggaatcggatggaccagcaccaaaatcaggttacagcata
ttcagcgacaccatagatctcatcaaattcatcatgacgttgatatccttcacagacgcc
tcagcatcttcacatgaaaaaatctttgctgtgttatgcatgcgctgccagtccattctg
cacatggccatgttccgttacaaaaaggacactgcaataaagtattccaggatcctgaat
gaccacttcaagagttcttccagagtaacacaagcaccttctccgtgtgttgcaagaagc
acaggcatgccttctcctctttctccaatgccatctcctgccagttctgcaagttctcag
ccaggatcgaacgctagcaactgcagtggcaacagcattggctcttcactcactatcccc
tatactatcccaagcatcacctcttcctatgtaaacatcacttcctatatcctctatgcg
tatgatatttgggaacaggctgatgcactggccaggaagaataaggagttttttgccgaa
ctcagcacagcgacgtgcactctggcactgaacagtagcatgactgaactggtacactat
gttagacagggtttacagtggctgagactggaaacaaatacgccttaa
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