Columba livia (rock pigeon): 102085463
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Entry
102085463 CDS
T02912
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clv04515
]
102085463 (DSCAM)
Cell adhesion molecules [BR:
clv04515
]
Immunoglobulin superfamily
DSCAM family
102085463 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Ig_4
C1-set
V-set_CD47
Pur_ac_phosph_N
Sp38
Interfer-bind
ChitinaseA_N
C2-set_3
DUF6377
Adeno_E3_CR1
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
102085463
NCBI-ProteinID:
XP_013225459
LinkDB
All DBs
Position
Unknown
AA seq
1879 aa
AA seq
DB search
MITTCLTKPSILSSVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVS
LVSGPRFLITSTGALYILDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPS
ILDGFDHRKAMAGQRVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPS
DSGNYVCEVWNNYGTAEMIGRLYVTQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELS
WYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGT
PKIISAFNEKVVSPGEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVV
SYLNISNAQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCR
VIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTS
QSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTID
NIDFTSSLRISNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKA
VILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLC
KVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDR
IINPEMSRYLVSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPP
DPPEIEIREVRARSIALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTRDVSPQLNQAT
IIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWK
APKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQA
CNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRV
IYWANLLDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKE
DVPGPPAGVKAAAASASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSY
RIPNLSRNRQYSVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLP
CKAVGDPAPTVKWMKDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWG
SDEIILNLQVQVPPDQPRLTTCYILQYSEDNSEQWGSFPISPSERSYRLETLKCGTWYKF
TLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVKLNLIGWNDGGCPITSF
TLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFATLNYD
GSTIPPLIKSVVESEEGLATNEGLKMLVTISCILVGVLLLFVMLLVVRRRRREQRLKRLR
DAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDA
DFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGPTARNRYASQ
WTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSSMVSTESASS
TYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTSSTPSESGIC
RFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQGTSRDLGLGQACL
EPQKSRTLKRPTVLEPIPMETSSTREVQSWQPGAVATLPQREGAELGQAAKMSSSQESLL
DSRGHLKGNNPYAKSYTLV
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgattacaacttgtttaacaaaaccttctattttatcttcagttttacgggaaccctat
acagtccgtgtggaggaccagaaagccatgagaggcaatgtagcagtgttcaagtgcatt
atcccctcctctgtggaggcatacatcactgttgtctcatgggagaaagacacagtctcg
cttgtctcaggacctagatttctcatcacatccacgggagccttgtatattttagatgta
cagaatgaagatggactgtacaactaccgatgcatcacaaggcacagatacactggagaa
acacgacaaagcaacagtgcaagactttttgtatcagatccagcgaactcagctccatct
attctagatgggtttgaccaccgtaaagccatggcaggacagcgagtggagctgccttgc
aaagcatcagggcaccctgcaccaaagtatcgttggctgaaggacaacgttccctgggag
cctgacagcagatttcggcagacggttacaggtctgctgatcgagaacacgcgtccctcg
gactcaggcaactatgtctgtgaggtgtggaacaactatgggactgctgagatgataggg
cgtctatatgtaacacaaccactaaaagccacgatcagcccacggaaagtaaaaagcagt
gttggtagtcaagtgtccttgtcctgcagtgtgacgggaactgaggaccaggagctctcc
tggtatcgtaatggtgaaatcatcaaccctggtaacaatgttcggatcactggcatcaat
cgggagaaccttattatggatggcatggccaaaagtgatggtggagcttaccagtgcttt
gtgcgcaaggacaagatgtctgctcaagactatgtacaggtggtactagaagatggaact
cccaaaatcatttctgccttcaatgagaaagtggtgagtccaggagagccagtctctctt
atgtgtaatgtgaaggggactcctctgcctacaatcacttggactctggatgaagatccc
attgtgaaggacggcagtcatcgtatcagccagattatcacctccgaaggcaacgtggtc
agttacctgaatatctctaatgctcaggtccgagatggtggagtttatcgctgtactgcc
aacaactctgctggagtcgtcctgtaccaggctcgaataaacgtaagaggaccagcaagc
attcgaccaatgaagaacatcacagcaatagctggacgtgacacctacatccactgccgt
gtgatcggctacccatattactccatcaagtggtacaagaactctaacctgctaccattt
aaccatcgccaagtggcatttgagaacaacgggacactgaaactttcagatgtgcagaag
gaagtagacgagggcgaatacacgtgcaatgtacttgttcaaccgcagctgtccaccagc
cagagtgtgcatgtgacagtaaaagttcccccttttattcagccttttgagtttccaaga
ttctccatcgggcaacgggtcttcattccctgtgtggtggtgtccggagatttgcccatc
acaatcacctggcagaaggacggcaggcccatcccagccagcctcggggtgacgattgac
aacattgacttcaccagctccttaaggatttctaatctttcactgatgcataatgggaat
tatacctgtatagctagaaatgatgcagcagctgtggaacaccaaagccaattaattgtg
agagtgccccccaggtttgtggttcagcccagtgatcaggatgggatctatggaaaagct
gtaattctcaactgctctgcagagggttatcccgttcctaccattgtctggaagtactca
aaaggtgccggagttcctcagttccagccaattgcactgaacggtcgtatccagcttctc
acaaatggttccttgctgattaaacatgtgctggaagaagacagtggatactacctctgc
aaggtcagcaatgatgtgggagcagacgtcagcaagtccatgtacctcactgttaaaatt
ccagctatgataacttcctatccaaataccaccttggcaacgcaaggtcaaaagaaggag
atgagctgcacagcacatggagagaaacccatcattgtccgctgggaaaaagaagaccga
atcattaaccctgaaatgtcccgttaccttgtttccaccaaggaagttggagatgaagtg
atttctaccctgcagattttgccaaccgtgcgtgaagattctggcttcttttcctgccat
gccatcaattcttatggggaggatcgtggaataattcagctcactgtgcaagagcccccc
gaccctcctgaaatagaaatccgagaagtgagagcacgcagcattgccctcagatggacc
atgggctttgatggaaacagccctatcactggctatgatattgagtgcaagaacaagtca
gactcttgggattctgttcagaggaccagagatgtctcccctcagctaaaccaagccact
atcattgacctccacccctcctcaacttacaatattcgcatgtatgccaagaatcgcatc
ggcaagagcgaggccagcaatgagctcaccatcactaccgatgaagcagctcctgatggt
ccacctcaggatgtccagcttgagcctatatcttctcaaagcattagggtcacctggaag
gctccaaagaagcacttgcaaaatggaattattcgtggataccagataggttatcgggag
tacagtgcagggggcaatttccagttcaacatcatcagtattgataccactggggacagt
gaagtttatacactgaataacctgaaaaaattcacccagtatggcatggtagtccaggct
tgcaaccgggctggaataggaccttcttctcaggaaatcatcaccactactcttgaggat
gtgcccagttgccctccagggaacgtgcaagccactgccacatcaccagaaaccatctct
atttcttggtcaacattggcaaaagaaaccctgaatgggattctgcaaggattcagggtt
atttactgggccaatctcttggacggagagctaggagagataaagaatgtcactactaca
cagccatcactagaacttgatggcctggaaaaatacaccaactacagcattcaggtgttg
gcttttacacgagctggagatggagtgagaagtgaacaaattttcacccgcactaaagaa
gatgttccaggtccccccgctggtgttaaagcagctgcggcttcagcctccactgtcttc
gtctcctggctccctcccctcaagctgaacggcatcattcggaaatacaccgtcttctgc
tcacacccctaccccacagtaatcagcgagtttgaagcctctcccgactcattttcctac
agaatccccaacctgagccggaatcgccagtacagtgtctgggtggtggcagtgactgct
gcgggaagaggcaacagcagtgagattatcactgtggagccactagctaaagctcctgcc
aggattttgacattcagtggcacagtgacaactccctggatgaaagacattgtcctccct
tgcaaagctgtgggagacccagctccgacagtcaaatggatgaaagatagtaacgggaca
cccagtctagtgatgattgatgggcgaagaagcatctttagcaatggcagctttgtcatc
cgtactgtgaaagcagaagactctgggtactacagttgtgtggccagtaacaactgggga
tcagatgaaataattttgaatttgcaggtacaagttcctccagaccaaccaaggctcact
acatgttatattttgcagtactcagaagataacagtgagcagtggggtagttttcccatt
agccctagtgagaggtcctaccgtttagaaacactgaaatgtggcacttggtacaagttt
actctgactgctcagaatggagtggggccaggtcgcatcagcgagatcattgaggccaaa
acacttggaaaagagccacagttttccaaggaacaagagctctttgctagtatcaacacc
acaagagtgaagctgaacctgataggctggaatgacggtggctgccccatcacctccttc
accctggagtatcggccatttgggacaacagtgtggacaactgctcagcggacatccttg
tcaaagtcctacattctgtatgacctccaggaggcaacctggtatgagcttcaaatgaga
gtatgcaacagtgctggctgtgcagagaaacaagccaaatttgcaacactcaattatgat
ggcagtacaatccctccacttattaagtcggttgtggaaagcgaggaagggctggcaacc
aatgaagggctaaagatgctggtgaccatttcctgtatcttggtcggggtcttgctgctc
tttgtgatgctgctggtcgtgcggaggaggaggagggagcagagactgaagaggctgcga
gatgcgaagagtttggctgaaatgcttatgagcaagaatacaaggacatcagatactctt
aacaagcagcagcaaacactgaggatgcacatagacatccccagagcacagcttctgatt
gaggaaagagacacaatggaaaccattgatgacagatcaactgttctgctcactgatgct
gactttggagagacatctaagcagaaatcactgactgtcacccacacagtacattaccag
tctgtgtcacaagctacaggaccactggtggatgtttctgatgcccgaccgggaacaaat
cctaccacaaggaggagcgccaaaaccggacccacggctcgcaaccgctatgccagtcag
tggaccctcaataggcctcatcctaccatatcagcccataccctcaccacagactggagg
ctgcccacccccagaccagcaggatcagtggacaaggaaagcgacagctacagcgtcagc
ccctcgcaggacacagatcgagcaagaagcagcatggtctccacagaaagtgcctcctca
acatacgaagagctagcgagagcatatgagcacgcaaaaatggaagagcagctgagacat
gctaagttcaccatcacagaatgcttcatatccgacacatcgtcagagcagctcacggca
gggactaatgactacacagacagcctgacctcaagcacgccgtcagagtcggggatttgc
agatttaccgcatccccccccaaacctcaggatggagggcgagtgatgaacatggcagtt
ccaaaggcacatcggccaggtgatctcatgcatttgccaccctaccttaggatggacttt
ttattgaaccgtggcgtgcagggcacaagcagagacctgggtttggggcaagcctgctta
gagccgcagaaaagccgaaccttgaagcgtcccaccgtcctggagccgatccccatggag
acgtcctccacgagagaagtacagtcttggcaacctggtgctgtggcgacgttacctcag
cgagaaggagctgagctgggacaggcagcaaaaatgagcagctcccaagaatccctgctg
gactcccggggccacttaaaaggaaacaatccctacgcaaaatcttacaccctggtataa
DBGET
integrated database retrieval system
